Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-23P-201ENST00000363283 107 ntBASIC1.1□□□□□ -2.23
ACTBP60709 RNA5SP493-201ENST00000364115 91 ntBASIC1.1□□□□□ -2.23
ACTBP60709 SNORA62.1-201ENST00000364287 154 ntBASIC1.1□□□□□ -2.23
ACTBP60709 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ACTBP60709 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
ACTBP60709 RNU6-160P-201ENST00000384591 107 ntBASIC1.1□□□□□ -2.23
ACTBP60709 Y_RNA.597-201ENST00000410463 100 ntBASIC1.1□□□□□ -2.23
ACTBP60709 RNU2-41P-201ENST00000410991 178 ntBASIC1.1□□□□□ -2.23
ACTBP60709 BTF3P4-201ENST00000418852 495 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AL669831.1-202ENST00000428504 417 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AL365400.1-201ENST00000431854 640 ntBASIC1.1□□□□□ -2.23
ACTBP60709 MTND2P4-201ENST00000445034 1004 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTBP60709 AC006026.2-201ENST00000457376 180 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTBP60709 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTBP60709 RNU6-333P-201ENST00000459117 107 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AC087477.1-201ENST00000465747 340 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AC009646.1-201ENST00000510455 318 ntBASIC1.1□□□□□ -2.23
ACTBP60709 RNU6-1053P-201ENST00000515930 101 ntBASIC1.1□□□□□ -2.23
ACTBP60709 SNORA31.17-201ENST00000516953 127 ntBASIC1.1□□□□□ -2.23
ACTBP60709 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.1□□□□□ -2.23
ACTBP60709 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.1□□□□□ -2.23
ACTBP60709 AC022616.6-201ENST00000520479 119 ntBASIC1.1□□□□□ -2.23
ACTBP60709 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTBP60709 DNAJC19P9-201ENST00000555084 351 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.1□□□□□ -2.23
ACTBP60709 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.1□□□□□ -2.23
ACTBP60709 AC137800.2-201ENST00000574375 120 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.1□□□□□ -2.23
ACTBP60709 MIR548AC-201ENST00000585049 88 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AC092106.3-201ENST00000611308 722 ntBASIC1.1□□□□□ -2.23
ACTBP60709 RMST_7.1-201ENST00000621935 268 ntBASIC1.1□□□□□ -2.23
ACTBP60709 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
ACTBP60709 AP002782.1-201ENST00000623107 614 ntBASIC1.1□□□□□ -2.23
ACTBP60709 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.1□□□□□ -2.23
ACTBP60709 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ACTBP60709 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
ACTBP60709 AP000560.1-201ENST00000624150 1937 ntBASIC1.09□□□□□ -2.23
ACTBP60709 RNU6-271P-201ENST00000363858 105 ntBASIC1.09□□□□□ -2.23
ACTBP60709 Y_RNA.302-201ENST00000364997 102 ntBASIC1.09□□□□□ -2.23
ACTBP60709 RNU6-157P-201ENST00000383957 107 ntBASIC1.09□□□□□ -2.23
ACTBP60709 MIR578-201ENST00000384828 96 ntBASIC1.09□□□□□ -2.23
ACTBP60709 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.09□□□□□ -2.23
ACTBP60709 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.09□□□□□ -2.23
ACTBP60709 GDI2P2-201ENST00000445131 608 ntBASIC1.09□□□□□ -2.23
ACTBP60709 EXOSC3P1-201ENST00000448649 500 ntBASIC1.09□□□□□ -2.23
ACTBP60709 MTCO3P9-201ENST00000506989 781 ntBASIC1.09□□□□□ -2.23
ACTBP60709 HSPE1P23-201ENST00000509838 286 ntBASIC1.09□□□□□ -2.23
ACTBP60709 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.09□□□□□ -2.23
ACTBP60709 RNU7-51P-201ENST00000516560 62 ntBASIC1.09□□□□□ -2.23
ACTBP60709 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.09□□□□□ -2.23
ACTBP60709 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.09□□□□□ -2.23
ACTBP60709 MIR4498-201ENST00000577599 66 ntBASIC1.09□□□□□ -2.23
ACTBP60709 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.09□□□□□ -2.23
ACTBP60709 AC091135.1-201ENST00000585943 307 ntBASIC1.09□□□□□ -2.23
ACTBP60709 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.09□□□□□ -2.24
ACTBP60709 RNU6-743P-201ENST00000364151 106 ntBASIC1.08□□□□□ -2.24
ACTBP60709 SNORD114-6-201ENST00000364393 72 ntBASIC1.08□□□□□ -2.24
ACTBP60709 RNU6-636P-201ENST00000384598 107 ntBASIC1.08□□□□□ -2.24
ACTBP60709 RPS3AP36-201ENST00000398190 775 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.08□□□□□ -2.24
ACTBP60709 MTCO2P21-201ENST00000419780 677 ntBASIC1.08□□□□□ -2.24
ACTBP60709 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.08□□□□□ -2.24
ACTBP60709 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.08□□□□□ -2.24
ACTBP60709 AC139712.2-201ENST00000424302 339 ntBASIC1.08□□□□□ -2.24
ACTBP60709 FTH1P12-201ENST00000432137 551 ntBASIC1.08□□□□□ -2.24
ACTBP60709 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.08□□□□□ -2.24
ACTBP60709 AC092473.1-201ENST00000441098 221 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC007969.2-201ENST00000441891 191 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AL022238.1-201ENST00000442557 355 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AL360271.2-201ENST00000447710 161 ntBASIC1.08□□□□□ -2.24
ACTBP60709 USP9YP25-201ENST00000457708 443 ntBASIC1.08□□□□□ -2.24
ACTBP60709 RNU1-123P-201ENST00000458950 160 ntBASIC1.08□□□□□ -2.24
ACTBP60709 snoU109.3-201ENST00000459477 145 ntBASIC1.08□□□□□ -2.24
ACTBP60709 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.08□□□□□ -2.24
ACTBP60709 MTCYBP18-201ENST00000501056 747 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.08□□□□□ -2.24
ACTBP60709 AC090821.2-201ENST00000523552 176 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC005786.1-201ENST00000588553 154 ntBASIC1.08□□□□□ -2.24
ACTBP60709 BNIP3P40-201ENST00000596017 556 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC121334.2-201ENST00000605387 271 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC012409.4-201ENST00000612923 249 ntBASIC1.08□□□□□ -2.24
ACTBP60709 U6.42-201ENST00000618440 107 ntBASIC1.08□□□□□ -2.24
ACTBP60709 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ACTBP60709 AL049777.1-201ENST00000622740 518 ntBASIC1.08□□□□□ -2.24
ACTBP60709 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.08□□□□□ -2.24
ACTBP60709 AC130454.1-201ENST00000622948 401 ntBASIC1.08□□□□□ -2.24
ACTBP60709 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ACTBP60709 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
ACTBP60709 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ACTBP60709 AC073343.1-201ENST00000328239 651 ntBASIC1.07□□□□□ -2.24
ACTBP60709 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ACTBP60709 MIR337-201ENST00000362281 93 ntBASIC1.07□□□□□ -2.24
ACTBP60709 RNU4-1-201ENST00000363925 141 ntBASIC1.07□□□□□ -2.24
ACTBP60709 Y_RNA.332-201ENST00000365271 113 ntBASIC1.07□□□□□ -2.24
ACTBP60709 SNORD115.1-201ENST00000391109 76 ntBASIC1.07□□□□□ -2.24
ACTBP60709 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
ACTBP60709 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.07□□□□□ -2.24
ACTBP60709 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms