Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC090517.3-201ENST00000625170 141 ntBASIC1.6□□□□□ -2.15
VSX2P58304 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VSX2P58304 snoU2_19.1-201ENST00000362361 80 ntBASIC1.59□□□□□ -2.15
VSX2P58304 RNU6-179P-201ENST00000363350 107 ntBASIC1.59□□□□□ -2.15
VSX2P58304 RNY1P12-201ENST00000364251 105 ntBASIC1.59□□□□□ -2.15
VSX2P58304 RNU6-487P-201ENST00000365430 104 ntBASIC1.59□□□□□ -2.15
VSX2P58304 RNU2-23P-201ENST00000410545 195 ntBASIC1.59□□□□□ -2.15
VSX2P58304 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.15
VSX2P58304 C1DP2-201ENST00000418167 426 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AL358453.1-201ENST00000422522 250 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.59□□□□□ -2.15
VSX2P58304 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.59□□□□□ -2.15
VSX2P58304 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.59□□□□□ -2.15
VSX2P58304 AC073614.1-201ENST00000438690 650 ntBASIC1.59□□□□□ -2.15
VSX2P58304 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.59□□□□□ -2.15
VSX2P58304 AC012308.1-201ENST00000451232 178 ntBASIC1.59□□□□□ -2.15
VSX2P58304 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.59□□□□□ -2.15
VSX2P58304 MTCYBP40-201ENST00000509390 1135 ntBASIC1.59□□□□□ -2.15
VSX2P58304 Vault.3-201ENST00000516676 95 ntBASIC1.59□□□□□ -2.15
VSX2P58304 RNU6-965P-201ENST00000516721 96 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AC087883.1-201ENST00000551882 391 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
VSX2P58304 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.59□□□□□ -2.15
VSX2P58304 AC008250.2-201ENST00000615261 205 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AC063943.3-201ENST00000615562 356 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AL159153.1-201ENST00000619688 317 ntBASIC1.59□□□□□ -2.15
VSX2P58304 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.59□□□□□ -2.15
VSX2P58304 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
VSX2P58304 RNU6-655P-201ENST00000362858 107 ntBASIC1.58□□□□□ -2.16
VSX2P58304 RNU6-234P-201ENST00000365229 104 ntBASIC1.58□□□□□ -2.16
VSX2P58304 RNU6-74P-201ENST00000384235 107 ntBASIC1.58□□□□□ -2.16
VSX2P58304 SNORA40.3-201ENST00000390964 122 ntBASIC1.58□□□□□ -2.16
VSX2P58304 RNA5SP390-201ENST00000410191 113 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.58□□□□□ -2.16
VSX2P58304 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.58□□□□□ -2.16
VSX2P58304 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VSX2P58304 MTND4P20-201ENST00000424125 869 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.58□□□□□ -2.16
VSX2P58304 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
VSX2P58304 KATNBL1P3-201ENST00000443475 909 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AL137159.1-201ENST00000452808 512 ntBASIC1.58□□□□□ -2.16
VSX2P58304 ART2BP-201ENST00000453501 499 ntBASIC1.58□□□□□ -2.16
VSX2P58304 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.58□□□□□ -2.16
VSX2P58304 AL122001.1-201ENST00000457027 370 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AL162395.1-201ENST00000457882 422 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC006512.1-201ENST00000468816 291 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.58□□□□□ -2.16
VSX2P58304 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.58□□□□□ -2.16
VSX2P58304 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.58□□□□□ -2.16
VSX2P58304 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.58□□□□□ -2.16
VSX2P58304 OR5AL2P-201ENST00000532185 920 ntBASIC1.58□□□□□ -2.16
VSX2P58304 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
VSX2P58304 GNAI2P1-201ENST00000541815 315 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.58□□□□□ -2.16
VSX2P58304 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.58□□□□□ -2.16
VSX2P58304 AC098848.2-201ENST00000588023 330 ntBASIC1.58□□□□□ -2.16
VSX2P58304 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.58□□□□□ -2.16
VSX2P58304 AC026585.1-201ENST00000619582 524 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC097372.5-201ENST00000623665 376 ntBASIC1.58□□□□□ -2.16
VSX2P58304 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VSX2P58304 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
VSX2P58304 HAUS6P2-201ENST00000433254 2404 ntBASIC1.58□□□□□ -2.16
VSX2P58304 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.57□□□□□ -2.16
VSX2P58304 AC006026.1-201ENST00000444025 1803 ntBASIC1.57□□□□□ -2.16
VSX2P58304 RNU6-212P-201ENST00000362642 104 ntBASIC1.57□□□□□ -2.16
VSX2P58304 RNU6-1303P-201ENST00000364841 107 ntBASIC1.57□□□□□ -2.16
VSX2P58304 SNORD48-201ENST00000364953 64 ntBASIC1.57□□□□□ -2.16
VSX2P58304 Y_RNA.367-201ENST00000365544 101 ntBASIC1.57□□□□□ -2.16
VSX2P58304 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
VSX2P58304 MIR1-2-201ENST00000384961 85 ntBASIC1.57□□□□□ -2.16
VSX2P58304 CBX3P9-201ENST00000402326 552 ntBASIC1.57□□□□□ -2.16
VSX2P58304 MIR1283-2-201ENST00000408621 87 ntBASIC1.57□□□□□ -2.16
VSX2P58304 RNU6-607P-201ENST00000411283 108 ntBASIC1.57□□□□□ -2.16
VSX2P58304 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
VSX2P58304 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.57□□□□□ -2.16
VSX2P58304 OR6C66P-201ENST00000414917 930 ntBASIC1.57□□□□□ -2.16
VSX2P58304 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.57□□□□□ -2.16
VSX2P58304 MTND2P18-201ENST00000419962 1030 ntBASIC1.57□□□□□ -2.16
VSX2P58304 BX510359.4-201ENST00000423750 193 ntBASIC1.57□□□□□ -2.16
VSX2P58304 RPL31P35-201ENST00000431058 377 ntBASIC1.57□□□□□ -2.16
VSX2P58304 AC007969.2-201ENST00000441891 191 ntBASIC1.57□□□□□ -2.16
VSX2P58304 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.57□□□□□ -2.16
VSX2P58304 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.57□□□□□ -2.16
VSX2P58304 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.57□□□□□ -2.16
VSX2P58304 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.57□□□□□ -2.16
VSX2P58304 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.57□□□□□ -2.16
VSX2P58304 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
VSX2P58304 AC016727.1-205ENST00000605437 569 ntBASIC1.57□□□□□ -2.16
VSX2P58304 SCARNA4-202ENST00000625402 129 ntBASIC1.57□□□□□ -2.16
VSX2P58304 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.57□□□□□ -2.16
VSX2P58304 FARSBP1-201ENST00000435808 1778 ntBASIC1.57□□□□□ -2.16
VSX2P58304 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VSX2P58304 OR4G2P-201ENST00000328113 903 ntBASIC1.56□□□□□ -2.16
VSX2P58304 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VSX2P58304 RNU6-78P-201ENST00000362897 107 ntBASIC1.56□□□□□ -2.16
VSX2P58304 SNORA62.1-201ENST00000364287 154 ntBASIC1.56□□□□□ -2.16
VSX2P58304 RNU4-42P-201ENST00000364738 142 ntBASIC1.56□□□□□ -2.16
VSX2P58304 Y_RNA.338-201ENST00000365320 114 ntBASIC1.56□□□□□ -2.16
VSX2P58304 RNU6-550P-201ENST00000391057 101 ntBASIC1.56□□□□□ -2.16
VSX2P58304 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms