Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU6-39P-201ENST00000384344 107 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 SNORD115.1-201ENST00000391109 76 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AL033519.2-201ENST00000403958 392 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AC009310.1-201ENST00000414414 451 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AC106883.1-201ENST00000418805 562 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 MTCYBP5-201ENST00000423752 1135 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.46□□□□□ -2.18
CLDN6P56747 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.46□□□□□ -2.18
CLDN6P56747 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.46□□□□□ -2.18
CLDN6P56747 RPL30P6-201ENST00000475925 342 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AC010587.1-201ENST00000505809 469 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AF131216.2-201ENST00000512316 564 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 BNIP3P6-201ENST00000549284 499 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.46□□□□□ -2.18
CLDN6P56747 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.46□□□□□ -2.18
CLDN6P56747 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLDN6P56747 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 MIR6734-201ENST00000621166 68 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CLDN6P56747 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.46□□□□□ -2.18
CLDN6P56747 RNU4-42P-201ENST00000364738 142 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 MIR513B-201ENST00000385136 84 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 RPL21P1-201ENST00000399532 476 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 Y_RNA.597-201ENST00000410463 100 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 SSR1P2-201ENST00000415208 787 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC007283.2-201ENST00000424739 197 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 MTND5P2-201ENST00000442927 1142 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AMD1P1-201ENST00000457220 922 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC093259.1-201ENST00000509755 300 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 MTATP6P9-201ENST00000515039 680 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC011604.1-201ENST00000545978 196 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.45□□□□□ -2.18
CLDN6P56747 AC091489.2-201ENST00000566263 604 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AL078603.1-201ENST00000603824 313 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AL359999.1-201ENST00000604513 294 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC105129.3-201ENST00000605455 485 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC063943.3-201ENST00000615562 356 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC026585.1-201ENST00000619582 524 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.45□□□□□ -2.18
CLDN6P56747 AL157786.1-207ENST00000627771 695 ntBASIC1.45□□□□□ -2.18
CLDN6P56747 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLDN6P56747 OR4G1P-203ENST00000641984 1631 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 MIR126-201ENST00000362291 85 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 Y_RNA.99-201ENST00000363138 105 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.44□□□□□ -2.18
CLDN6P56747 RNU6-925P-201ENST00000384629 104 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 MRPL42P2-201ENST00000403169 426 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 RNA5SP111-201ENST00000411386 101 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 AL031779.1-201ENST00000415663 330 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.44□□□□□ -2.18
CLDN6P56747 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN6P56747 RPS15AP10-201ENST00000432472 382 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 IFNA20P-201ENST00000436840 528 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 RPS24P1-201ENST00000438550 371 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN6P56747 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN6P56747 AL590365.1-201ENST00000450788 243 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 MTCO2P29-201ENST00000465212 189 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN6P56747 MTCYBP40-201ENST00000509390 1135 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN6P56747 AP003181.2-201ENST00000528941 181 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.44□□□□□ -2.18
CLDN6P56747 MTND1P8-201ENST00000571424 950 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 AC098848.2-201ENST00000588023 330 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 AL031775.1-201ENST00000607014 887 ntBASIC1.44□□□□□ -2.18
CLDN6P56747 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.44□□□□□ -2.18
CLDN6P56747 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.44□□□□□ -2.18
CLDN6P56747 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLDN6P56747 RNU5F-6P-201ENST00000362979 116 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 RNU4-1-201ENST00000363925 141 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 RNU6-641P-201ENST00000384006 107 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 SNORA24.1-201ENST00000384401 135 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLDN6P56747 MIR934-201ENST00000401241 83 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 MTCYBP36-201ENST00000404146 440 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 RPS20P15-201ENST00000412792 311 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 BTF3L4P1-201ENST00000413813 468 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AL590556.1-201ENST00000423231 483 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.43□□□□□ -2.18
CLDN6P56747 AL360271.2-201ENST00000447710 161 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.43□□□□□ -2.18
CLDN6P56747 RPL30P1-201ENST00000488676 339 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AC034244.1-201ENST00000507687 207 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AC117522.1-201ENST00000509821 380 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN6P56747 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.43□□□□□ -2.18
CLDN6P56747 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLDN6P56747 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AC010928.2-201ENST00000588017 287 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 RNU6-87P-201ENST00000607561 108 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 AC068944.2-201ENST00000610373 403 ntBASIC1.43□□□□□ -2.18
CLDN6P56747 TUSC7.1-201ENST00000610969 165 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 369.7 ms