Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU6-942P-201ENST00000363002 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 Y_RNA.142-201ENST00000363491 102 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-11P-201ENST00000364234 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-1280P-201ENST00000365211 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU1-100P-201ENST00000365255 165 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-25P-201ENST00000383873 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-1-201ENST00000383898 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU1-138P-201ENST00000384093 164 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-48P-201ENST00000384161 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-36P-201ENST00000384172 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-4P-201ENST00000384205 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-5P-201ENST00000384238 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-3P-201ENST00000384314 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-16P-201ENST00000384385 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-15P-201ENST00000384534 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-2-201ENST00000384627 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-29P-201ENST00000384637 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-9-201ENST00000384776 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-33P-201ENST00000384793 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC4P56524 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC4P56524 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 HMGB1P18-201ENST00000438801 619 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 OSTCP8-201ENST00000445117 448 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 HIGD1AP2-201ENST00000446367 280 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC4P56524 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.88□□□□□ -1.95
HDAC4P56524 RNU7-138P-201ENST00000459479 64 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-581P-201ENST00000516214 105 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-1332P-201ENST00000516666 104 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
HDAC4P56524 AC025423.5-201ENST00000550230 219 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.88□□□□□ -1.95
HDAC4P56524 AC007151.1-201ENST00000572774 483 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 MIR3605-201ENST00000583214 100 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 OR1M4P-201ENST00000589199 287 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AC008121.1-201ENST00000603244 268 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AL049779.4-201ENST00000604500 156 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AL033523.1-201ENST00000605153 153 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 RNU6-6P-201ENST00000606623 107 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.88□□□□□ -1.95
HDAC4P56524 MIR7515-201ENST00000637837 67 ntBASIC2.88□□□□□ -1.95
HDAC4P56524 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.88□□□□□ -1.95
HDAC4P56524 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HDAC4P56524 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC4P56524 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC4P56524 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
HDAC4P56524 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC4P56524 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
HDAC4P56524 SNORA68.1-201ENST00000364537 132 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 Y_RNA.263-201ENST00000364659 114 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 Y_RNA.339-201ENST00000365325 102 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 RNU6-1009P-201ENST00000390996 107 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 SNORD56-201ENST00000413522 71 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC4P56524 AL590632.1-201ENST00000424289 371 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC4P56524 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC4P56524 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.87□□□□□ -1.95
HDAC4P56524 PPP1R2P5-201ENST00000457256 603 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 AC006026.2-201ENST00000457376 180 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 RPL23AP45-201ENST00000476406 468 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC4P56524 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC4P56524 AC116655.1-201ENST00000508324 901 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 AC092436.3-201ENST00000511788 257 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 RNU6-237P-201ENST00000515985 71 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 Y_RNA.691-201ENST00000516611 103 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 RNU6-273P-201ENST00000516937 96 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HDAC4P56524 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.87□□□□□ -1.95
HDAC4P56524 AC087854.1-201ENST00000519706 414 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 COPS8P3-201ENST00000526024 482 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC4P56524 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.87□□□□□ -1.95
HDAC4P56524 ELOCP5-201ENST00000604924 333 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 AC064836.2-201ENST00000609491 462 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.87□□□□□ -1.95
HDAC4P56524 AC025253.1-201ENST00000613623 543 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 TPTEP1-208ENST00000636884 213 ntBASIC2.87□□□□□ -1.95
HDAC4P56524 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
HDAC4P56524 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HDAC4P56524 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.86□□□□□ -1.95
HDAC4P56524 RNU1-112P-201ENST00000364401 164 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 SNORD116-11-201ENST00000383882 92 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 Y_RNA.474-201ENST00000384341 102 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 Y_RNA.529-201ENST00000384586 119 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HDAC4P56524 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.86□□□□□ -1.95
HDAC4P56524 PTGES3P4-201ENST00000426243 356 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.86□□□□□ -1.95
HDAC4P56524 AL359672.1-201ENST00000442302 409 ntBASIC2.86□□□□□ -1.95
HDAC4P56524 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms