Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LIMK2P53671 AMD1P1-201ENST00000457220 922 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK2P53671 BTF3P12-201ENST00000519620 469 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK2P53671 COX6CP5-201ENST00000527162 228 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 RANP3-201ENST00000530970 276 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMK2P53671 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMK2P53671 PSMA3P-201ENST00000555485 635 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK2P53671 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMK2P53671 AC091152.3-201ENST00000604227 325 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 AC009248.2-201ENST00000619826 254 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 AC022140.2-201ENST00000623500 188 ntBASIC2.42□□□□□ -2.02
LIMK2P53671 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LIMK2P53671 MTND4P14-201ENST00000435799 1354 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 RNA5SP289-201ENST00000362332 137 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 Y_RNA.378-201ENST00000365652 113 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 RNU1-138P-201ENST00000384093 164 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 RNU6-166P-201ENST00000384371 107 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 RNU4-26P-201ENST00000410270 107 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 EEF1A1P40-201ENST00000412883 573 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.41□□□□□ -2.02
LIMK2P53671 AC104389.3-201ENST00000445629 235 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 RPL7P12-201ENST00000446719 750 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AC233279.1-201ENST00000455300 423 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 GZMAP1-201ENST00000503054 631 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.41□□□□□ -2.02
LIMK2P53671 MTND3P22-201ENST00000510932 243 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.41□□□□□ -2.02
LIMK2P53671 RNU6-1038P-201ENST00000516516 104 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 MTND4P7-201ENST00000523876 130 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.41□□□□□ -2.02
LIMK2P53671 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.41□□□□□ -2.02
LIMK2P53671 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AL670379.4-201ENST00000605279 254 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AL359697.1-201ENST00000624879 587 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 AC069528.2-201ENST00000624849 1991 ntBASIC2.41□□□□□ -2.02
LIMK2P53671 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
LIMK2P53671 AC016717.2-201ENST00000609089 5141 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LIMK2P53671 RNU6-116P-201ENST00000384042 109 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 SNORA32.2-201ENST00000384049 122 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 RNU6-1127P-201ENST00000384580 107 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 RNU6-19P-201ENST00000384718 107 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 CISD1P1-201ENST00000393907 327 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AL356432.1-201ENST00000405809 419 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 SNORA3.2-201ENST00000408221 125 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 RNU6-1328P-201ENST00000410938 106 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
LIMK2P53671 AC009161.1-201ENST00000417306 376 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 PTGES3P4-201ENST00000426243 356 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.4□□□□□ -2.03
LIMK2P53671 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.4□□□□□ -2.03
LIMK2P53671 AL445687.1-201ENST00000439946 251 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC093019.1-201ENST00000443135 252 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC007547.1-201ENST00000462177 490 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.4□□□□□ -2.03
LIMK2P53671 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.4□□□□□ -2.03
LIMK2P53671 FAM206BP-201ENST00000510179 541 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.4□□□□□ -2.03
LIMK2P53671 AC087241.2-201ENST00000535801 324 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 SCOCP1-201ENST00000554676 349 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 RPS3AP23-202ENST00000574601 686 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC104984.5-201ENST00000586878 94 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 BNIP3P25-201ENST00000596023 559 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC092807.2-201ENST00000609367 243 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AC009233.1-201ENST00000616477 371 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.4□□□□□ -2.03
LIMK2P53671 AC112487.2-201ENST00000637950 304 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 HSPA8P4-201ENST00000511877 1920 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIMK2P53671 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.4□□□□□ -2.03
LIMK2P53671 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.03
LIMK2P53671 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.39□□□□□ -2.03
LIMK2P53671 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
LIMK2P53671 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.39□□□□□ -2.03
LIMK2P53671 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.39□□□□□ -2.03
LIMK2P53671 MIR412-201ENST00000362142 91 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 Y_RNA.100-201ENST00000363141 102 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 Y_RNA.356-201ENST00000365475 113 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 SNORA75B-201ENST00000384053 137 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 RNU6-831P-201ENST00000384548 107 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 Y_RNA.529-201ENST00000384586 119 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 MT-TD-201ENST00000387419 68 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 RNU6-510P-201ENST00000391239 108 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 RNU4-53P-201ENST00000410828 140 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 AL121890.1-201ENST00000435457 205 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 IFNA20P-201ENST00000436840 528 ntBASIC2.39□□□□□ -2.03
LIMK2P53671 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.39□□□□□ -2.03
LIMK2P53671 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.39□□□□□ -2.03
LIMK2P53671 FTH1P25-201ENST00000447665 469 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms