Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
COPB1P53618 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
COPB1P53618 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.16□□□□□ -1.9
COPB1P53618 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 RNA5SP374-201ENST00000362939 125 ntBASIC3.16□□□□□ -1.9
COPB1P53618 RNU1-73P-201ENST00000383971 164 ntBASIC3.16□□□□□ -1.9
COPB1P53618 Y_RNA.463-201ENST00000384271 102 ntBASIC3.16□□□□□ -1.9
COPB1P53618 RNU6-1035P-201ENST00000384477 107 ntBASIC3.16□□□□□ -1.9
COPB1P53618 MIR518D-201ENST00000385014 87 ntBASIC3.16□□□□□ -1.9
COPB1P53618 MIR34A-201ENST00000385130 110 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AL591034.1-201ENST00000407447 340 ntBASIC3.16□□□□□ -1.9
COPB1P53618 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
COPB1P53618 RNU6-174P-201ENST00000410406 106 ntBASIC3.16□□□□□ -1.9
COPB1P53618 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AC243428.1-201ENST00000421099 264 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 USMG5P1-201ENST00000425964 177 ntBASIC3.16□□□□□ -1.9
COPB1P53618 HIGD1AP2-201ENST00000446367 280 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 RNU6-1037P-201ENST00000459571 107 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 AC018437.1-201ENST00000492214 406 ntBASIC3.16□□□□□ -1.9
COPB1P53618 Y_RNA.687-201ENST00000516558 91 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.16□□□□□ -1.9
COPB1P53618 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.16□□□□□ -1.9
COPB1P53618 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.16□□□□□ -1.9
COPB1P53618 AC008121.1-201ENST00000603244 268 ntBASIC3.16□□□□□ -1.9
COPB1P53618 AC040896.1-201ENST00000613819 479 ntBASIC3.16□□□□□ -1.9
COPB1P53618 U6.99-201ENST00000637524 83 ntBASIC3.16□□□□□ -1.9
COPB1P53618 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
COPB1P53618 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COPB1P53618 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COPB1P53618 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COPB1P53618 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RNU6-827P-201ENST00000365553 106 ntBASIC3.15□□□□□ -1.91
COPB1P53618 Y_RNA.422-201ENST00000384054 114 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RNU6-72P-201ENST00000384285 79 ntBASIC3.15□□□□□ -1.91
COPB1P53618 MIR606-201ENST00000384851 96 ntBASIC3.15□□□□□ -1.91
COPB1P53618 MIR888-201ENST00000401186 77 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AL138885.1-201ENST00000405921 675 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.15□□□□□ -1.91
COPB1P53618 TMEM167AP1-201ENST00000423409 219 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AC098831.1-201ENST00000440661 216 ntBASIC3.15□□□□□ -1.91
COPB1P53618 DAP3P1-201ENST00000441522 278 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RNA5SP310-201ENST00000459084 116 ntBASIC3.15□□□□□ -1.91
COPB1P53618 snoU109.2-201ENST00000459316 135 ntBASIC3.15□□□□□ -1.91
COPB1P53618 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.15□□□□□ -1.91
COPB1P53618 RNU6-470P-201ENST00000515954 104 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RNA5SP341-201ENST00000516261 117 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RNU6-327P-201ENST00000516270 127 ntBASIC3.15□□□□□ -1.91
COPB1P53618 SCARNA16.2-201ENST00000516520 172 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RNU6-928P-201ENST00000516876 104 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AL451007.1-201ENST00000595491 289 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AL355598.1-201ENST00000604169 202 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AC116312.1-201ENST00000606841 314 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.15□□□□□ -1.91
COPB1P53618 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.15□□□□□ -1.91
COPB1P53618 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
COPB1P53618 MIR6733-201ENST00000635723 61 ntBASIC3.15□□□□□ -1.91
COPB1P53618 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
COPB1P53618 CUL1P1-201ENST00000509510 2425 ntBASIC3.15□□□□□ -1.91
COPB1P53618 AP003122.5-201ENST00000527668 3766 ntBASIC3.15□□□□□ -1.91
COPB1P53618 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COPB1P53618 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
COPB1P53618 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COPB1P53618 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COPB1P53618 MIR422A-201ENST00000362286 90 ntBASIC3.14□□□□□ -1.91
COPB1P53618 RNU6-884P-201ENST00000363889 107 ntBASIC3.14□□□□□ -1.91
COPB1P53618 RNU1-140P-201ENST00000365040 165 ntBASIC3.14□□□□□ -1.91
COPB1P53618 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
COPB1P53618 RNU6-1160P-201ENST00000384546 104 ntBASIC3.14□□□□□ -1.91
COPB1P53618 SNORA41-201ENST00000384675 132 ntBASIC3.14□□□□□ -1.91
COPB1P53618 RPL26P27-201ENST00000414397 437 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.14□□□□□ -1.91
COPB1P53618 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.14□□□□□ -1.91
COPB1P53618 AL031274.1-201ENST00000450334 232 ntBASIC3.14□□□□□ -1.91
COPB1P53618 SSXP4-201ENST00000451349 245 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AC008571.1-201ENST00000467232 300 ntBASIC3.14□□□□□ -1.91
COPB1P53618 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.14□□□□□ -1.91
COPB1P53618 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.14□□□□□ -1.91
COPB1P53618 RNU6-120P-201ENST00000516077 103 ntBASIC3.14□□□□□ -1.91
COPB1P53618 RNU6-1045P-201ENST00000516321 107 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
COPB1P53618 MIR4782-201ENST00000577987 79 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.14□□□□□ -1.91
COPB1P53618 HSPE1P7-201ENST00000604681 321 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AL355802.3-201ENST00000607571 545 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AC005046.1-201ENST00000608515 625 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AC011890.2-201ENST00000613393 294 ntBASIC3.14□□□□□ -1.91
COPB1P53618 AC091925.1-201ENST00000623204 462 ntBASIC3.14□□□□□ -1.91
COPB1P53618 U4.7-201ENST00000638126 106 ntBASIC3.14□□□□□ -1.91
COPB1P53618 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COPB1P53618 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COPB1P53618 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.14□□□□□ -1.91
COPB1P53618 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COPB1P53618 Y_RNA.2-201ENST00000362330 96 ntBASIC3.13□□□□□ -1.91
COPB1P53618 Y_RNA.252-201ENST00000364556 101 ntBASIC3.13□□□□□ -1.91
COPB1P53618 RNU6-1317P-201ENST00000364582 104 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms