Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP001025.1-201ENST00000486139 332 ntBASIC2.48□□□□□ -2.01
PDX1P52945 AC018710.1-201ENST00000506509 158 ntBASIC2.48□□□□□ -2.01
PDX1P52945 SEM1P1-201ENST00000506694 209 ntBASIC2.48□□□□□ -2.01
PDX1P52945 AC107953.1-201ENST00000522216 297 ntBASIC2.48□□□□□ -2.01
PDX1P52945 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.48□□□□□ -2.01
PDX1P52945 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.48□□□□□ -2.01
PDX1P52945 MIR4801-201ENST00000582704 82 ntBASIC2.48□□□□□ -2.01
PDX1P52945 MIR3942-201ENST00000585264 109 ntBASIC2.48□□□□□ -2.01
PDX1P52945 AL121917.1-203ENST00000605534 577 ntBASIC2.48□□□□□ -2.01
PDX1P52945 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PDX1P52945 AL359198.2-201ENST00000611836 194 ntBASIC2.48□□□□□ -2.01
PDX1P52945 MIR7515-201ENST00000637837 67 ntBASIC2.48□□□□□ -2.01
PDX1P52945 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.48□□□□□ -2.01
PDX1P52945 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.48□□□□□ -2.01
PDX1P52945 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PDX1P52945 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
PDX1P52945 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.48□□□□□ -2.01
PDX1P52945 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDX1P52945 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDX1P52945 RNU6-254P-201ENST00000363377 107 ntBASIC2.47□□□□□ -2.01
PDX1P52945 SNORA68.1-201ENST00000364537 132 ntBASIC2.47□□□□□ -2.01
PDX1P52945 RNU6-827P-201ENST00000365553 106 ntBASIC2.47□□□□□ -2.01
PDX1P52945 Y_RNA.530-201ENST00000384587 101 ntBASIC2.47□□□□□ -2.01
PDX1P52945 RPL21P75-201ENST00000396599 483 ntBASIC2.47□□□□□ -2.01
PDX1P52945 RPL21P28-201ENST00000401418 483 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.47□□□□□ -2.01
PDX1P52945 MTCO3P18-201ENST00000440206 761 ntBASIC2.47□□□□□ -2.01
PDX1P52945 RPL21P39-201ENST00000463605 483 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AC087190.1-201ENST00000484462 480 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AC093591.1-201ENST00000491435 481 ntBASIC2.47□□□□□ -2.01
PDX1P52945 RPL21P16-201ENST00000495531 483 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AC008628.2-201ENST00000502605 298 ntBASIC2.47□□□□□ -2.01
PDX1P52945 SNORA25.11-201ENST00000515935 105 ntBASIC2.47□□□□□ -2.01
PDX1P52945 SNORA31.23-201ENST00000517219 133 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AC104576.1-201ENST00000524225 88 ntBASIC2.47□□□□□ -2.01
PDX1P52945 ELOCP31-201ENST00000540463 467 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AP002770.2-201ENST00000543613 532 ntBASIC2.47□□□□□ -2.01
PDX1P52945 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PDX1P52945 AC090616.3-201ENST00000582184 217 ntBASIC2.47□□□□□ -2.01
PDX1P52945 AC018638.8-201ENST00000588755 281 ntBASIC2.47□□□□□ -2.01
PDX1P52945 ELOCP5-201ENST00000604924 333 ntBASIC2.47□□□□□ -2.01
PDX1P52945 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PDX1P52945 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.47□□□□□ -2.01
PDX1P52945 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
PDX1P52945 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
PDX1P52945 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
PDX1P52945 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
PDX1P52945 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PDX1P52945 Y_RNA.100-201ENST00000363141 102 ntBASIC2.46□□□□□ -2.02
PDX1P52945 RNU6-105P-201ENST00000363909 104 ntBASIC2.46□□□□□ -2.02
PDX1P52945 RNU6-336P-201ENST00000364891 107 ntBASIC2.46□□□□□ -2.02
PDX1P52945 Y_RNA.414-201ENST00000384011 101 ntBASIC2.46□□□□□ -2.02
PDX1P52945 SNORA32.2-201ENST00000384049 122 ntBASIC2.46□□□□□ -2.02
PDX1P52945 MIR27B-201ENST00000385129 97 ntBASIC2.46□□□□□ -2.02
PDX1P52945 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.46□□□□□ -2.02
PDX1P52945 NDUFA5P4-201ENST00000436704 385 ntBASIC2.46□□□□□ -2.02
PDX1P52945 AC013470.1-201ENST00000453438 462 ntBASIC2.46□□□□□ -2.02
PDX1P52945 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.46□□□□□ -2.02
PDX1P52945 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.46□□□□□ -2.02
PDX1P52945 RPL39P5-202ENST00000512505 151 ntBASIC2.46□□□□□ -2.02
PDX1P52945 RN7SKP24-201ENST00000515888 284 ntBASIC2.46□□□□□ -2.02
PDX1P52945 RNU6-1332P-201ENST00000516666 104 ntBASIC2.46□□□□□ -2.02
PDX1P52945 SCARNA11.3-201ENST00000517276 130 ntBASIC2.46□□□□□ -2.02
PDX1P52945 CR383656.8-201ENST00000549046 145 ntBASIC2.46□□□□□ -2.02
PDX1P52945 AC103996.1-201ENST00000555468 102 ntBASIC2.46□□□□□ -2.02
PDX1P52945 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.46□□□□□ -2.02
PDX1P52945 AP000787.2-201ENST00000604432 568 ntBASIC2.46□□□□□ -2.02
PDX1P52945 BNIP3P10-201ENST00000605360 577 ntBASIC2.46□□□□□ -2.02
PDX1P52945 AC064836.2-201ENST00000609491 462 ntBASIC2.46□□□□□ -2.02
PDX1P52945 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.46□□□□□ -2.02
PDX1P52945 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.46□□□□□ -2.02
PDX1P52945 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PDX1P52945 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PDX1P52945 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PDX1P52945 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.45□□□□□ -2.02
PDX1P52945 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.45□□□□□ -2.02
PDX1P52945 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PDX1P52945 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PDX1P52945 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PDX1P52945 SNORD56.1-201ENST00000362913 68 ntBASIC2.45□□□□□ -2.02
PDX1P52945 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RNU6-1083P-201ENST00000384022 107 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RNU6-843P-201ENST00000384454 104 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RNU6-831P-201ENST00000384548 107 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
PDX1P52945 MIR450B-201ENST00000401182 78 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RPL19P1-201ENST00000411635 428 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.45□□□□□ -2.02
PDX1P52945 Z98742.2-201ENST00000431564 187 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RPS15AP7-201ENST00000439294 405 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AL359672.1-201ENST00000442302 409 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.45□□□□□ -2.02
PDX1P52945 RPS27AP9-201ENST00000477681 438 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.45□□□□□ -2.02
PDX1P52945 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.45□□□□□ -2.02
PDX1P52945 AC116353.2-201ENST00000505332 712 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AC079140.5-201ENST00000507882 310 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.45□□□□□ -2.02
PDX1P52945 AC087854.1-201ENST00000519706 414 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms