Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC092747.3-201ENST00000603769 301 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AL670379.10-201ENST00000604330 253 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AL670379.9-201ENST00000605428 253 ntBASIC2.62□□□□□ -1.99
CLK1P49759 MIR5739-201ENST00000619803 80 ntBASIC2.62□□□□□ -1.99
CLK1P49759 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AC024581.2-201ENST00000619986 252 ntBASIC2.62□□□□□ -1.99
CLK1P49759 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.62□□□□□ -1.99
CLK1P49759 AC244517.12-201ENST00000623581 663 ntBASIC2.62□□□□□ -1.99
CLK1P49759 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
CLK1P49759 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLK1P49759 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CLK1P49759 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLK1P49759 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLK1P49759 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.61□□□□□ -1.99
CLK1P49759 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
CLK1P49759 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
CLK1P49759 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLK1P49759 RNU6-715P-201ENST00000365204 103 ntBASIC2.61□□□□□ -1.99
CLK1P49759 Y_RNA.339-201ENST00000365325 102 ntBASIC2.61□□□□□ -1.99
CLK1P49759 XGY1-201ENST00000381172 446 ntBASIC2.61□□□□□ -1.99
CLK1P49759 Y_RNA.399-201ENST00000383955 105 ntBASIC2.61□□□□□ -1.99
CLK1P49759 Y_RNA.534-201ENST00000384599 112 ntBASIC2.61□□□□□ -1.99
CLK1P49759 SNORD70.1-201ENST00000391007 85 ntBASIC2.61□□□□□ -1.99
CLK1P49759 NCOR1P3-201ENST00000420479 303 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AL591212.2-201ENST00000433923 257 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC007677.1-201ENST00000445757 515 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.61□□□□□ -1.99
CLK1P49759 PPP1R2P5-201ENST00000457256 603 ntBASIC2.61□□□□□ -1.99
CLK1P49759 MTND4P17-201ENST00000470444 350 ntBASIC2.61□□□□□ -1.99
CLK1P49759 RPL7P43-201ENST00000478876 753 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC090525.1-201ENST00000479116 478 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC096576.1-201ENST00000489014 359 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.61□□□□□ -1.99
CLK1P49759 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.61□□□□□ -1.99
CLK1P49759 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.61□□□□□ -1.99
CLK1P49759 RNU2-69P-201ENST00000516061 100 ntBASIC2.61□□□□□ -1.99
CLK1P49759 Y_RNA.701-201ENST00000516812 110 ntBASIC2.61□□□□□ -1.99
CLK1P49759 RNU6-1088P-201ENST00000516850 104 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.61□□□□□ -1.99
CLK1P49759 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.61□□□□□ -1.99
CLK1P49759 AC074050.1-201ENST00000563247 211 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.61□□□□□ -1.99
CLK1P49759 MIR4782-201ENST00000577987 79 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.61□□□□□ -1.99
CLK1P49759 AL138889.2-201ENST00000603883 242 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AL670379.4-201ENST00000605279 254 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC016727.1-205ENST00000605437 569 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC022893.3-201ENST00000607665 437 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AC104237.2-201ENST00000612456 443 ntBASIC2.61□□□□□ -1.99
CLK1P49759 FAM157A-202ENST00000615155 405 ntBASIC2.61□□□□□ -1.99
CLK1P49759 AL359547.2-201ENST00000615810 418 ntBASIC2.61□□□□□ -1.99
CLK1P49759 MTND4P23-201ENST00000447723 1363 ntBASIC2.61□□□□□ -1.99
CLK1P49759 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLK1P49759 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLK1P49759 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLK1P49759 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLK1P49759 Y_RNA.67-201ENST00000362870 100 ntBASIC2.6□□□□□ -1.99
CLK1P49759 RNU6-525P-201ENST00000363685 104 ntBASIC2.6□□□□□ -1.99
CLK1P49759 RNU6-288P-201ENST00000363690 104 ntBASIC2.6□□□□□ -1.99
CLK1P49759 MIR491-201ENST00000384877 84 ntBASIC2.6□□□□□ -1.99
CLK1P49759 SNORA48.5-201ENST00000391143 135 ntBASIC2.6□□□□□ -1.99
CLK1P49759 RPS12P24-201ENST00000412619 387 ntBASIC2.6□□□□□ -1.99
CLK1P49759 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL354751.2-201ENST00000415471 210 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AC016831.2-201ENST00000417179 352 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL160275.3-201ENST00000423876 471 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL591704.1-201ENST00000432574 275 ntBASIC2.6□□□□□ -1.99
CLK1P49759 RPL36AP48-201ENST00000485521 314 ntBASIC2.6□□□□□ -1.99
CLK1P49759 HMGN1P13-201ENST00000505795 138 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.6□□□□□ -1.99
CLK1P49759 RNU6-189P-201ENST00000516120 101 ntBASIC2.6□□□□□ -1.99
CLK1P49759 RNU7-193P-201ENST00000516723 65 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AC005668.1-201ENST00000571142 476 ntBASIC2.6□□□□□ -1.99
CLK1P49759 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL356575.1-201ENST00000603008 283 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL138963.2-201ENST00000605137 226 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL158032.1-201ENST00000605401 106 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AL022345.1-201ENST00000607292 135 ntBASIC2.6□□□□□ -1.99
CLK1P49759 MIR15A-201ENST00000607334 83 ntBASIC2.6□□□□□ -1.99
CLK1P49759 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.6□□□□□ -1.99
CLK1P49759 AC091953.5-201ENST00000622919 233 ntBASIC2.6□□□□□ -1.99
CLK1P49759 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.6□□□□□ -1.99
CLK1P49759 Z75746.1-201ENST00000440243 2080 ntBASIC2.59□□□□□ -1.99
CLK1P49759 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.59□□□□□ -1.99
CLK1P49759 RNU6-254P-201ENST00000363377 107 ntBASIC2.59□□□□□ -1.99
CLK1P49759 Y_RNA.333-201ENST00000365274 102 ntBASIC2.59□□□□□ -1.99
CLK1P49759 Y_RNA.419-201ENST00000384041 102 ntBASIC2.59□□□□□ -1.99
CLK1P49759 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
CLK1P49759 Y_RNA.460-201ENST00000384255 102 ntBASIC2.59□□□□□ -1.99
CLK1P49759 RNA5SP219-201ENST00000390940 113 ntBASIC2.59□□□□□ -1.99
CLK1P49759 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
CLK1P49759 EIF4E2P1-201ENST00000393781 255 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK1P49759 AC097463.2-201ENST00000421074 142 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.59□□□□□ -1.99
CLK1P49759 RPS3AP52-201ENST00000435639 297 ntBASIC2.59□□□□□ -1.99
CLK1P49759 NDUFA5P4-201ENST00000436704 385 ntBASIC2.59□□□□□ -1.99
CLK1P49759 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.59□□□□□ -1.99
CLK1P49759 AC004383.1-201ENST00000438135 289 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms