Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SMURF2P1-201ENST00000514992 481 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AC109479.2-201ENST00000517842 174 ntBASIC2.45□□□□□ -2.02
LHX1P48742 MTND1P35-201ENST00000526739 508 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.45□□□□□ -2.02
LHX1P48742 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.45□□□□□ -2.02
LHX1P48742 AC105245.1-201ENST00000581934 244 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AL121917.1-203ENST00000605534 577 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AC092807.2-201ENST00000609367 243 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
LHX1P48742 AC073869.6-201ENST00000640656 341 ntBASIC2.45□□□□□ -2.02
LHX1P48742 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.45□□□□□ -2.02
LHX1P48742 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
LHX1P48742 AC027514.1-201ENST00000588561 1603 ntBASIC2.44□□□□□ -2.02
LHX1P48742 MIR6073-201ENST00000352083 89 ntBASIC2.44□□□□□ -2.02
LHX1P48742 Y_RNA.38-201ENST00000362617 102 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RNU6-527P-201ENST00000363425 104 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RNY4P14-201ENST00000363656 96 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RNY3P3-201ENST00000363816 102 ntBASIC2.44□□□□□ -2.02
LHX1P48742 Y_RNA.231-201ENST00000364358 102 ntBASIC2.44□□□□□ -2.02
LHX1P48742 Y_RNA.450-201ENST00000384198 113 ntBASIC2.44□□□□□ -2.02
LHX1P48742 MIR514A2-201ENST00000385131 88 ntBASIC2.44□□□□□ -2.02
LHX1P48742 MIR514A3-201ENST00000385132 88 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RNU6-220P-201ENST00000390919 107 ntBASIC2.44□□□□□ -2.02
LHX1P48742 U6atac.2-201ENST00000408644 118 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX1P48742 AL591043.1-201ENST00000432461 424 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RPL7P12-201ENST00000446719 750 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX1P48742 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.44□□□□□ -2.02
LHX1P48742 AC087884.1-201ENST00000469738 328 ntBASIC2.44□□□□□ -2.02
LHX1P48742 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.44□□□□□ -2.02
LHX1P48742 AP001025.1-201ENST00000486139 332 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RPS27P27-201ENST00000498779 255 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX1P48742 RNU6-377P-201ENST00000515965 102 ntBASIC2.44□□□□□ -2.02
LHX1P48742 SNORA14.1-201ENST00000516113 141 ntBASIC2.44□□□□□ -2.02
LHX1P48742 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX1P48742 AC010186.2-204ENST00000537668 439 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.44□□□□□ -2.02
LHX1P48742 SNRPGP18-201ENST00000553000 214 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AC136619.2-201ENST00000563361 631 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.44□□□□□ -2.02
LHX1P48742 AC069294.1-201ENST00000608397 350 ntBASIC2.44□□□□□ -2.02
LHX1P48742 AC103705.1-201ENST00000619013 241 ntBASIC2.44□□□□□ -2.02
LHX1P48742 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.44□□□□□ -2.02
LHX1P48742 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.43□□□□□ -2.02
LHX1P48742 OR56A5-201ENST00000340110 738 ntBASIC2.43□□□□□ -2.02
LHX1P48742 RNU1-91P-201ENST00000364746 163 ntBASIC2.43□□□□□ -2.02
LHX1P48742 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
LHX1P48742 RNU6-622P-201ENST00000384272 103 ntBASIC2.43□□□□□ -2.02
LHX1P48742 RNU6-1140P-201ENST00000410517 106 ntBASIC2.43□□□□□ -2.02
LHX1P48742 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
LHX1P48742 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.43□□□□□ -2.02
LHX1P48742 AC018634.1-201ENST00000437554 401 ntBASIC2.43□□□□□ -2.02
LHX1P48742 AL031274.1-201ENST00000450334 232 ntBASIC2.43□□□□□ -2.02
LHX1P48742 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.43□□□□□ -2.02
LHX1P48742 RNU6-1208P-201ENST00000459588 107 ntBASIC2.43□□□□□ -2.02
LHX1P48742 AC080013.2-201ENST00000460866 323 ntBASIC2.43□□□□□ -2.02
LHX1P48742 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.43□□□□□ -2.02
LHX1P48742 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.43□□□□□ -2.02
LHX1P48742 RPPH1-2P-201ENST00000516688 293 ntBASIC2.43□□□□□ -2.02
LHX1P48742 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.43□□□□□ -2.02
LHX1P48742 MIR3945-201ENST00000581853 98 ntBASIC2.43□□□□□ -2.02
LHX1P48742 AC010525.2-201ENST00000590920 195 ntBASIC2.43□□□□□ -2.02
LHX1P48742 RNU6-85P-201ENST00000605989 107 ntBASIC2.43□□□□□ -2.02
LHX1P48742 MIR6766-201ENST00000622641 72 ntBASIC2.43□□□□□ -2.02
LHX1P48742 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.42□□□□□ -2.02
LHX1P48742 AC007336.1-201ENST00000576365 3828 ntBASIC2.42□□□□□ -2.02
LHX1P48742 RNU6-1010P-201ENST00000362757 107 ntBASIC2.42□□□□□ -2.02
LHX1P48742 RNU6-451P-201ENST00000362921 107 ntBASIC2.42□□□□□ -2.02
LHX1P48742 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
LHX1P48742 SNORA70B-201ENST00000384210 135 ntBASIC2.42□□□□□ -2.02
LHX1P48742 MIR548F1-201ENST00000408667 84 ntBASIC2.42□□□□□ -2.02
LHX1P48742 RNA5SP390-201ENST00000410191 113 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.42□□□□□ -2.02
LHX1P48742 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.42□□□□□ -2.02
LHX1P48742 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.42□□□□□ -2.02
LHX1P48742 USP9YP18-201ENST00000425912 695 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.42□□□□□ -2.02
LHX1P48742 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
LHX1P48742 ERLEC1P1-201ENST00000433806 578 ntBASIC2.42□□□□□ -2.02
LHX1P48742 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.42□□□□□ -2.02
LHX1P48742 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.42□□□□□ -2.02
LHX1P48742 AC026464.5-201ENST00000562497 722 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC090897.2-201ENST00000581715 130 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC073410.2-201ENST00000603240 332 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC080078.2-201ENST00000603766 501 ntBASIC2.42□□□□□ -2.02
LHX1P48742 RNU6-89P-201ENST00000606519 100 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.42□□□□□ -2.02
LHX1P48742 AC090517.2-201ENST00000614966 680 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC024581.2-201ENST00000619986 252 ntBASIC2.42□□□□□ -2.02
LHX1P48742 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LHX1P48742 AC097372.5-201ENST00000623665 376 ntBASIC2.42□□□□□ -2.02
LHX1P48742 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LHX1P48742 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LHX1P48742 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
LHX1P48742 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LHX1P48742 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms