Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNORA14A-201ENST00000364773 135 ntBASIC2.83□□□□□ -1.96
SOX2P48431 RNU6-748P-201ENST00000384648 107 ntBASIC2.83□□□□□ -1.96
SOX2P48431 MIR544A-201ENST00000384855 91 ntBASIC2.83□□□□□ -1.96
SOX2P48431 MIR625-201ENST00000385047 85 ntBASIC2.83□□□□□ -1.96
SOX2P48431 RNU6-750P-201ENST00000390946 107 ntBASIC2.83□□□□□ -1.96
SOX2P48431 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.83□□□□□ -1.96
SOX2P48431 EIF1AXP1-201ENST00000419267 435 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AC007098.1-201ENST00000420122 367 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.83□□□□□ -1.96
SOX2P48431 MTCYBP10-201ENST00000424905 650 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AL445584.1-201ENST00000431451 330 ntBASIC2.83□□□□□ -1.96
SOX2P48431 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.83□□□□□ -1.96
SOX2P48431 AL031659.1-201ENST00000447075 539 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AL513124.1-201ENST00000450410 614 ntBASIC2.83□□□□□ -1.96
SOX2P48431 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
SOX2P48431 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.83□□□□□ -1.96
SOX2P48431 RN7SKP282-201ENST00000516824 299 ntBASIC2.83□□□□□ -1.96
SOX2P48431 RNU7-4P-201ENST00000516961 62 ntBASIC2.83□□□□□ -1.96
SOX2P48431 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SOX2P48431 CKS1BP7-201ENST00000522230 235 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AC004584.2-201ENST00000570407 410 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AC010653.1-201ENST00000571108 881 ntBASIC2.83□□□□□ -1.96
SOX2P48431 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.83□□□□□ -1.96
SOX2P48431 MIR5701-3-201ENST00000578890 82 ntBASIC2.83□□□□□ -1.96
SOX2P48431 MIR5701-1-201ENST00000585138 82 ntBASIC2.83□□□□□ -1.96
SOX2P48431 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.83□□□□□ -1.96
SOX2P48431 AC019176.2-201ENST00000611579 315 ntBASIC2.83□□□□□ -1.96
SOX2P48431 MIR5701-2-201ENST00000615634 82 ntBASIC2.83□□□□□ -1.96
SOX2P48431 RBBP8P1-201ENST00000449447 1844 ntBASIC2.83□□□□□ -1.96
SOX2P48431 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
SOX2P48431 MTND5P27-201ENST00000428871 1720 ntBASIC2.82□□□□□ -1.96
SOX2P48431 FAM35CP-201ENST00000554755 2470 ntBASIC2.82□□□□□ -1.96
SOX2P48431 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SOX2P48431 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.82□□□□□ -1.96
SOX2P48431 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SOX2P48431 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.82□□□□□ -1.96
SOX2P48431 Y_RNA.39-201ENST00000362620 98 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RNU1-105P-201ENST00000363470 161 ntBASIC2.82□□□□□ -1.96
SOX2P48431 MIR767-201ENST00000390228 109 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RPL21P3-201ENST00000395517 478 ntBASIC2.82□□□□□ -1.96
SOX2P48431 MIR1193-201ENST00000408109 78 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RNA5SP390-201ENST00000410191 113 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RN7SKP111-201ENST00000410349 271 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RNA5SP229-201ENST00000410809 99 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AL365496.1-201ENST00000426885 215 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.82□□□□□ -1.96
SOX2P48431 RN7SKP210-201ENST00000459176 261 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AC146507.2-201ENST00000460608 476 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RN7SL75P-201ENST00000461926 281 ntBASIC2.82□□□□□ -1.96
SOX2P48431 HMGN1P10-201ENST00000474557 553 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AP001025.1-201ENST00000486139 332 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RPL30P10-201ENST00000488148 337 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.82□□□□□ -1.96
SOX2P48431 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.82□□□□□ -1.96
SOX2P48431 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.82□□□□□ -1.96
SOX2P48431 RNU1-95P-201ENST00000516357 160 ntBASIC2.82□□□□□ -1.96
SOX2P48431 RNU1-128P-201ENST00000516704 160 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AL590705.4-201ENST00000532209 134 ntBASIC2.82□□□□□ -1.96
SOX2P48431 GNAI2P1-201ENST00000541815 315 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.82□□□□□ -1.96
SOX2P48431 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.82□□□□□ -1.96
SOX2P48431 AC060766.3-201ENST00000591442 263 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AL162730.1-201ENST00000605734 292 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AC107294.3-201ENST00000609211 526 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AL121772.2-201ENST00000614331 297 ntBASIC2.82□□□□□ -1.96
SOX2P48431 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.82□□□□□ -1.96
SOX2P48431 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SOX2P48431 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SOX2P48431 AC233981.2-201ENST00000611524 1614 ntBASIC2.82□□□□□ -1.96
SOX2P48431 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.81□□□□□ -1.96
SOX2P48431 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SOX2P48431 Y_RNA.80-201ENST00000362996 102 ntBASIC2.81□□□□□ -1.96
SOX2P48431 SNORD32A-201ENST00000364805 84 ntBASIC2.81□□□□□ -1.96
SOX2P48431 RNU1-64P-201ENST00000365443 163 ntBASIC2.81□□□□□ -1.96
SOX2P48431 RNU6-142P-201ENST00000384019 107 ntBASIC2.81□□□□□ -1.96
SOX2P48431 RNU6-968P-201ENST00000384076 107 ntBASIC2.81□□□□□ -1.96
SOX2P48431 SNORA5A-201ENST00000384111 134 ntBASIC2.81□□□□□ -1.96
SOX2P48431 RNU6-1222P-201ENST00000384615 107 ntBASIC2.81□□□□□ -1.96
SOX2P48431 MIR147B-201ENST00000390185 80 ntBASIC2.81□□□□□ -1.96
SOX2P48431 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SOX2P48431 MTCYBP2-201ENST00000407745 171 ntBASIC2.81□□□□□ -1.96
SOX2P48431 RNU2-23P-201ENST00000410545 195 ntBASIC2.81□□□□□ -1.96
SOX2P48431 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SOX2P48431 AC092423.1-201ENST00000430165 186 ntBASIC2.81□□□□□ -1.96
SOX2P48431 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX2P48431 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX2P48431 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX2P48431 SNRPGP7-201ENST00000469016 106 ntBASIC2.81□□□□□ -1.96
SOX2P48431 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX2P48431 RNU5B-3P-201ENST00000516601 115 ntBASIC2.81□□□□□ -1.96
SOX2P48431 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.81□□□□□ -1.96
SOX2P48431 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX2P48431 AC008737.2-201ENST00000599446 118 ntBASIC2.81□□□□□ -1.96
SOX2P48431 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.81□□□□□ -1.96
SOX2P48431 AC005592.1-201ENST00000566527 1640 ntBASIC2.81□□□□□ -1.96
SOX2P48431 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SOX2P48431 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SOX2P48431 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.8□□□□□ -1.96
SOX2P48431 RNA5SP124-201ENST00000362739 110 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms