Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.2□□□□□ -1.9
TM4SF4P48230 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.2□□□□□ -1.9
TM4SF4P48230 DEFB122-202ENST00000569013 197 ntBASIC3.2□□□□□ -1.9
TM4SF4P48230 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.2□□□□□ -1.9
TM4SF4P48230 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.2□□□□□ -1.9
TM4SF4P48230 ELOCP5-201ENST00000604924 333 ntBASIC3.2□□□□□ -1.9
TM4SF4P48230 DUXAP9-208ENST00000622815 614 ntBASIC3.2□□□□□ -1.9
TM4SF4P48230 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.2□□□□□ -1.9
TM4SF4P48230 AC002543.1-201ENST00000299783 1954 ntBASIC3.2□□□□□ -1.9
TM4SF4P48230 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TM4SF4P48230 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF4P48230 RNU6-428P-201ENST00000362942 107 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 RNU6-336P-201ENST00000364891 107 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 MTND3P8-201ENST00000412909 339 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 NDUFB4P5-201ENST00000415445 361 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 MTCO3P46-201ENST00000425787 232 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 AC013470.1-201ENST00000453438 462 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.19□□□□□ -1.9
TM4SF4P48230 PMCHL2-203ENST00000457791 237 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 MTCO2P30-201ENST00000503662 364 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 SNORA31.6-201ENST00000516241 130 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 SNORA31.23-201ENST00000517219 133 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF4P48230 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF4P48230 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF4P48230 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.19□□□□□ -1.9
TM4SF4P48230 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 AC090897.2-201ENST00000581715 130 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 AC023043.2-201ENST00000589678 1026 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 uc_338.5-201ENST00000611839 155 ntBASIC3.19□□□□□ -1.9
TM4SF4P48230 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF4P48230 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TM4SF4P48230 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM4SF4P48230 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.19□□□□□ -1.9
TM4SF4P48230 Z75746.1-201ENST00000440243 2080 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TM4SF4P48230 Y_RNA.279-201ENST00000364763 95 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 RNU6-831P-201ENST00000384548 107 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 RN7SKP32-201ENST00000410167 303 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 AC138393.2-201ENST00000414742 246 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF4P48230 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF4P48230 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.18□□□□□ -1.9
TM4SF4P48230 IFNA11P-201ENST00000446352 526 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 MTCO1P29-201ENST00000496868 288 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 SNORA20.3-201ENST00000516880 132 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.18□□□□□ -1.9
TM4SF4P48230 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
TM4SF4P48230 CKS1BP7-201ENST00000522230 235 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.18□□□□□ -1.9
TM4SF4P48230 MIR3199-1-201ENST00000582434 88 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 AC005730.3-201ENST00000583067 366 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 MIR3616-201ENST00000584070 92 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 AC078899.3-201ENST00000599065 212 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 AC073410.2-201ENST00000603240 332 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
TM4SF4P48230 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TM4SF4P48230 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TM4SF4P48230 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TM4SF4P48230 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF4P48230 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF4P48230 AL356057.3-201ENST00000402607 340 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AC097463.2-201ENST00000421074 142 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.17□□□□□ -1.9
TM4SF4P48230 RPL7P43-201ENST00000478876 753 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AC018437.1-201ENST00000492214 406 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AC008526.1-201ENST00000509149 338 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.17□□□□□ -1.9
TM4SF4P48230 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.17□□□□□ -1.9
TM4SF4P48230 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
TM4SF4P48230 MIR4648-201ENST00000580107 72 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 MIR4742-201ENST00000581069 85 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.17□□□□□ -1.9
TM4SF4P48230 MIR3942-201ENST00000585264 109 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 AL138726.1-201ENST00000614873 333 ntBASIC3.17□□□□□ -1.9
TM4SF4P48230 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TM4SF4P48230 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF4P48230 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.17□□□□□ -1.9
TM4SF4P48230 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF4P48230 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM4SF4P48230 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM4SF4P48230 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
TM4SF4P48230 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM4SF4P48230 RNU6-212P-201ENST00000362642 104 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 Y_RNA.212-201ENST00000364177 102 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM4SF4P48230 MIR544A-201ENST00000384855 91 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 RNU6-482P-201ENST00000391068 107 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 RNA5SP425-201ENST00000410336 112 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.16□□□□□ -1.9
TM4SF4P48230 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.16□□□□□ -1.9
TM4SF4P48230 NCOR1P3-201ENST00000420479 303 ntBASIC3.16□□□□□ -1.9
TM4SF4P48230 AL353572.1-201ENST00000442490 417 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms