Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC025423.5-201ENST00000550230 219 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC005668.1-201ENST00000571142 476 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC138761.3-201ENST00000579993 334 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC090897.2-201ENST00000581715 130 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 UBL5P2-201ENST00000583788 219 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 POLR3GP2-201ENST00000588366 668 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-1P43699 ELOCP5-201ENST00000604924 333 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC064836.2-201ENST00000609491 462 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AL133215.3-201ENST00000609801 448 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AL359198.2-201ENST00000611836 194 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC084757.4-201ENST00000616350 526 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC018692.3-201ENST00000623929 123 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-1P43699 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NKX2-1P43699 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-1P43699 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-1P43699 SNORD62.1-201ENST00000362541 86 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 SNORA71.3-201ENST00000362582 128 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 RNU6-293P-201ENST00000411259 106 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 Z98742.2-201ENST00000431564 187 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AL591043.1-201ENST00000432461 424 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 RPS15AP10-201ENST00000432472 382 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 RPS3AP52-201ENST00000435639 297 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AL445687.1-201ENST00000439946 251 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC007969.2-201ENST00000441891 191 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-1P43699 SNORD5.1-201ENST00000458800 75 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AP001025.1-201ENST00000486139 332 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-1P43699 Y_RNA.682-201ENST00000516457 100 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC109329.2-201ENST00000519658 482 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX2-1P43699 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-1P43699 AC027176.1-201ENST00000560204 514 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-1P43699 MIR3117-201ENST00000584034 78 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX2-1P43699 AL160281.1-201ENST00000605307 311 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC069294.1-201ENST00000608397 350 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC012314.7-201ENST00000619693 93 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC091953.5-201ENST00000622919 233 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC005858.4-201ENST00000623191 700 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 Z75746.1-201ENST00000440243 2080 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX2-1P43699 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NKX2-1P43699 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NKX2-1P43699 AC002543.1-201ENST00000299783 1954 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
NKX2-1P43699 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX2-1P43699 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
NKX2-1P43699 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX2-1P43699 Y_RNA.387-201ENST00000383918 102 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 MIR592-201ENST00000384959 97 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 RN7SKP27-201ENST00000410684 333 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 CYCSP48-201ENST00000417124 323 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.35□□□□□ -2.03
NKX2-1P43699 YME1L1P1-201ENST00000429435 297 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX2-1P43699 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.35□□□□□ -2.03
NKX2-1P43699 AC107399.1-201ENST00000451226 265 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 PRSS3P4-201ENST00000453323 162 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX2-1P43699 AC130509.1-201ENST00000464158 433 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC114801.2-201ENST00000503825 781 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC023141.11-201ENST00000508864 202 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX2-1P43699 TRAV32-201ENST00000553993 340 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC105137.2-201ENST00000569073 466 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 MIR4444-1-201ENST00000581696 74 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 MIR3605-201ENST00000583214 100 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX2-1P43699 MIR4444-2-201ENST00000584390 74 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 SRGNP1-201ENST00000603392 451 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 AC007792.1-201ENST00000623023 402 ntBASIC2.35□□□□□ -2.03
NKX2-1P43699 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NKX2-1P43699 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NKX2-1P43699 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NKX2-1P43699 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.34□□□□□ -2.03
NKX2-1P43699 Y_RNA.61-201ENST00000362835 102 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RNU6-1252P-201ENST00000363054 104 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RNU6-529P-201ENST00000363383 104 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RNA5SP267-201ENST00000364893 126 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 SNORA9.2-201ENST00000365361 133 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NKX2-1P43699 Y_RNA.509-201ENST00000384506 99 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 Y_RNA.529-201ENST00000384586 119 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 SNORA48.7-201ENST00000391302 135 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AL445529.1-201ENST00000398713 389 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RNU2-23P-201ENST00000410545 195 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RNU6-1245P-201ENST00000411130 106 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AP000275.1-201ENST00000411943 390 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 MTND4P28-201ENST00000426217 387 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC005326.1-201ENST00000429197 123 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 DAP3P1-201ENST00000441522 278 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 snoU13.14-201ENST00000459372 104 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC091153.1-201ENST00000466297 402 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RN7SL807P-201ENST00000470923 297 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 AC103975.1-201ENST00000482506 483 ntBASIC2.34□□□□□ -2.03
NKX2-1P43699 RPL23AP49-201ENST00000492925 468 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms