Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AK6P1-201ENST00000540219 478 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 HIF1AP1-201ENST00000553642 175 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 ZNF519P2-201ENST00000557032 169 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 AC136619.2-201ENST00000563361 631 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.23□□□□□ -2.05
TNFRSF4P43489 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFRSF4P43489 AC073539.2-201ENST00000597113 165 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFRSF4P43489 AC004492.1-201ENST00000607036 742 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 RMST_4.1-201ENST00000616886 107 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 U4.5-201ENST00000617137 123 ntBASIC2.23□□□□□ -2.05
TNFRSF4P43489 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TNFRSF4P43489 RNU6-487P-201ENST00000365430 104 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 RNU1-52P-201ENST00000384190 164 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 RNU6-45P-201ENST00000384471 107 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 RNU6-903P-201ENST00000391270 109 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 MIR548F1-201ENST00000408667 84 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AL096701.2-201ENST00000416920 238 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFRSF4P43489 HMGB1P31-201ENST00000437242 427 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC073415.1-201ENST00000449240 153 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 CYP2C59P-201ENST00000457790 269 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 RNU6-261P-201ENST00000459506 102 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC117503.1-201ENST00000472241 394 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC083798.1-201ENST00000472671 131 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AL163973.1-201ENST00000484753 577 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC074344.1-201ENST00000512823 224 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 RNU6-1281P-201ENST00000516223 105 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC073410.2-201ENST00000603240 332 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AL359198.2-201ENST00000611836 194 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AC241585.2-209ENST00000638217 143 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 AL354685.2-201ENST00000448218 1447 ntBASIC2.22□□□□□ -2.05
TNFRSF4P43489 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
TNFRSF4P43489 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 Y_RNA.9-201ENST00000362354 101 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNU6-1010P-201ENST00000362757 107 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNU6-1090P-201ENST00000364065 94 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNU6-715P-201ENST00000365204 103 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNA5SP240-201ENST00000365355 128 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNU6-483P-201ENST00000384088 108 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AL606923.1-201ENST00000406616 190 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNU6-607P-201ENST00000411283 108 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 FCF1P9-201ENST00000412546 282 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 USP9YP27-201ENST00000418455 438 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 ZNF885P-201ENST00000420174 1098 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 EIF4EP4-201ENST00000424916 578 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 MTND1P4-201ENST00000435196 415 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 IFNA11P-201ENST00000446352 526 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 AL139109.1-201ENST00000455491 297 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC090515.1-201ENST00000465295 476 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AP000852.1-201ENST00000472460 573 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 RNA5SP401-201ENST00000515920 127 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 SNORA43.2-201ENST00000516652 128 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 AP005435.4-201ENST00000529514 284 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 CBX3P7-201ENST00000532876 502 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 BNIP3P6-201ENST00000549284 499 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC025165.5-201ENST00000602802 578 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AL355297.2-201ENST00000604792 129 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC009233.1-201ENST00000616477 371 ntBASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.21□□□□□ -2.06
TNFRSF4P43489 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TNFRSF4P43489 AC002543.1-201ENST00000299783 1954 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TNFRSF4P43489 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 RNU6-482P-201ENST00000391068 107 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 Y_RNA.599-201ENST00000410489 109 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.2□□□□□ -2.06
TNFRSF4P43489 SCARNA18-201ENST00000459004 134 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.2□□□□□ -2.06
TNFRSF4P43489 TBCAP3-201ENST00000512475 312 ntBASIC2.2□□□□□ -2.06
TNFRSF4P43489 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms