Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PTPN9P43378 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PTPN9P43378 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN9P43378 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN9P43378 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PTPN9P43378 RNU6-827P-201ENST00000365553 106 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 SNORD116-20-201ENST00000384529 92 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 RNA5SP21-201ENST00000410917 96 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN9P43378 AC087499.2-201ENST00000432861 149 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 AL441985.1-201ENST00000457727 251 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN9P43378 RNU5F-8P-201ENST00000515941 111 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 RNU5B-3P-201ENST00000516601 115 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 IMMP1LP2-201ENST00000552954 492 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.86□□□□□ -1.95
PTPN9P43378 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PTPN9P43378 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 RPL23AP78-201ENST00000599928 470 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.86□□□□□ -1.95
PTPN9P43378 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.86□□□□□ -1.95
PTPN9P43378 AC138627.2-201ENST00000624202 601 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PTPN9P43378 MAPK10-266ENST00000641066 6555 ntBASIC2.86□□□□□ -1.95
PTPN9P43378 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PTPN9P43378 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN9P43378 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.85□□□□□ -1.95
PTPN9P43378 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN9P43378 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTPN9P43378 RNU6-336P-201ENST00000364891 107 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTPN9P43378 Y_RNA.474-201ENST00000384341 102 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AL512633.1-201ENST00000399931 655 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN9P43378 AC074117.2-201ENST00000417130 397 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AC009414.1-201ENST00000427200 443 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AC112220.1-201ENST00000434628 355 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN9P43378 AC107626.1-201ENST00000471084 183 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AC090525.1-201ENST00000479116 478 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 RAC1P5-201ENST00000512182 576 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 RNA5SP367-201ENST00000516557 118 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 RNU6-273P-201ENST00000516937 96 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PTPN9P43378 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.85□□□□□ -1.95
PTPN9P43378 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN9P43378 RAB11AP2-201ENST00000545905 639 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN9P43378 AC079600.2-201ENST00000550076 130 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 RPS3AP23-202ENST00000574601 686 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 MTCO3P13-201ENST00000577757 781 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 CPDP1-201ENST00000579660 283 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 AL121917.1-203ENST00000605534 577 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 uc_338.14-201ENST00000613162 166 ntBASIC2.85□□□□□ -1.95
PTPN9P43378 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN9P43378 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PTPN9P43378 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN9P43378 SNORD62.1-201ENST00000362541 86 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 RNU1-112P-201ENST00000364401 164 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 MIR9-1-201ENST00000385198 89 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 RNA5SP390-201ENST00000410191 113 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AL030996.1-201ENST00000411430 235 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.84□□□□□ -1.95
PTPN9P43378 AL591043.1-201ENST00000432461 424 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 FABP5P14-201ENST00000437273 393 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN9P43378 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.84□□□□□ -1.95
PTPN9P43378 U8.21-201ENST00000459536 136 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC103975.1-201ENST00000482506 483 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 RPL23AP49-201ENST00000492925 468 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC114801.2-201ENST00000503825 781 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC097462.2-201ENST00000504623 481 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AK3P2-201ENST00000507976 429 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN9P43378 CKS1BP7-201ENST00000522230 235 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPN9P43378 AC104576.1-201ENST00000524225 88 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPN9P43378 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.84□□□□□ -1.95
PTPN9P43378 TRAV32-201ENST00000553993 340 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.84□□□□□ -1.95
PTPN9P43378 AL355877.2-201ENST00000603670 358 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC113139.1-201ENST00000605049 239 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AL133215.3-201ENST00000609801 448 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AC244517.12-201ENST00000623581 663 ntBASIC2.84□□□□□ -1.95
PTPN9P43378 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.84□□□□□ -1.96
PTPN9P43378 MTND4P23-201ENST00000447723 1363 ntBASIC2.84□□□□□ -1.96
PTPN9P43378 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN9P43378 RNU6-858P-201ENST00000362436 107 ntBASIC2.83□□□□□ -1.96
PTPN9P43378 RNU6-428P-201ENST00000362942 107 ntBASIC2.83□□□□□ -1.96
PTPN9P43378 Y_RNA.529-201ENST00000384586 119 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms