Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.17□□□□□ -2.44
HTTP42858 AL356157.2-201ENST00000605122 111 ntBASIC-0.17□□□□□ -2.44
HTTP42858 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.17□□□□□ -2.44
HTTP42858 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.17□□□□□ -2.44
HTTP42858 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
HTTP42858 AC092573.2-201ENST00000434546 243 ntBASIC-0.17□□□□□ -2.44
HTTP42858 AL162395.1-201ENST00000457882 422 ntBASIC-0.17□□□□□ -2.44
HTTP42858 MTND1P22-201ENST00000510572 951 ntBASIC-0.17□□□□□ -2.44
HTTP42858 RNU6-319P-201ENST00000516025 108 ntBASIC-0.17□□□□□ -2.44
HTTP42858 SUMO2P16-201ENST00000519475 264 ntBASIC-0.17□□□□□ -2.44
HTTP42858 MIR3664-201ENST00000579074 99 ntBASIC-0.17□□□□□ -2.44
HTTP42858 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.17□□□□□ -2.44
HTTP42858 BBIP1P1-201ENST00000602999 279 ntBASIC-0.17□□□□□ -2.44
HTTP42858 RNU6-877P-201ENST00000383868 107 ntBASIC-0.18□□□□□ -2.44
HTTP42858 MT-TC-201ENST00000387405 66 ntBASIC-0.18□□□□□ -2.44
HTTP42858 RNU6-910P-201ENST00000390844 107 ntBASIC-0.18□□□□□ -2.44
HTTP42858 DHFRP6-201ENST00000401776 268 ntBASIC-0.18□□□□□ -2.44
HTTP42858 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.18□□□□□ -2.44
HTTP42858 AC018868.1-201ENST00000491307 315 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC091874.1-201ENST00000511402 339 ntBASIC-0.18□□□□□ -2.44
HTTP42858 RNU6-863P-201ENST00000515989 104 ntBASIC-0.18□□□□□ -2.44
HTTP42858 RN7SKP258-201ENST00000517151 304 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC005261.5-201ENST00000596280 355 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC012065.4-201ENST00000602445 679 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.18□□□□□ -2.44
HTTP42858 AL390237.1-201ENST00000404226 1415 ntBASIC-0.18□□□□□ -2.44
HTTP42858 RNA5SP264-201ENST00000363115 107 ntBASIC-0.18□□□□□ -2.44
HTTP42858 SNORA25B-201ENST00000365507 128 ntBASIC-0.18□□□□□ -2.44
HTTP42858 RNU6-217P-201ENST00000384164 104 ntBASIC-0.18□□□□□ -2.44
HTTP42858 PTGES3P1-201ENST00000439531 483 ntBASIC-0.18□□□□□ -2.44
HTTP42858 DAP3P1-201ENST00000441522 278 ntBASIC-0.18□□□□□ -2.44
HTTP42858 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
HTTP42858 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.18□□□□□ -2.44
HTTP42858 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.18□□□□□ -2.44
HTTP42858 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.18□□□□□ -2.44
HTTP42858 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.18□□□□□ -2.44
HTTP42858 MIR196A2-201ENST00000385189 110 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
HTTP42858 RAC1P8-201ENST00000427086 527 ntBASIC-0.18□□□□□ -2.44
HTTP42858 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.18□□□□□ -2.44
HTTP42858 TAAR7P-201ENST00000436141 242 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC010469.2-201ENST00000496412 480 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC113398.2-201ENST00000507630 558 ntBASIC-0.18□□□□□ -2.44
HTTP42858 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.18□□□□□ -2.44
HTTP42858 NAMPTP3-201ENST00000569273 224 ntBASIC-0.18□□□□□ -2.44
HTTP42858 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.18□□□□□ -2.44
HTTP42858 FTX_3.1-201ENST00000610451 147 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC040896.1-201ENST00000613819 479 ntBASIC-0.18□□□□□ -2.44
HTTP42858 AC092634.7-201ENST00000621022 103 ntBASIC-0.18□□□□□ -2.44
HTTP42858 MTND4P8-201ENST00000514997 1362 ntBASIC-0.19□□□□□ -2.44
HTTP42858 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
HTTP42858 RNU4-63P-201ENST00000411313 118 ntBASIC-0.19□□□□□ -2.44
HTTP42858 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.19□□□□□ -2.44
HTTP42858 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.19□□□□□ -2.44
HTTP42858 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.19□□□□□ -2.44
HTTP42858 AC022616.8-201ENST00000533569 253 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AC009237.15-201ENST00000610252 501 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNU5A-1-201ENST00000362698 116 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNU6-611P-201ENST00000384276 104 ntBASIC-0.19□□□□□ -2.44
HTTP42858 MIR194-1-201ENST00000384892 85 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNA5SP300-201ENST00000391197 107 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AL591034.2-201ENST00000402839 359 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNU6-575P-201ENST00000411326 105 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
HTTP42858 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.19□□□□□ -2.44
HTTP42858 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNU7-159P-201ENST00000459284 62 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.19□□□□□ -2.44
HTTP42858 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.19□□□□□ -2.44
HTTP42858 AC006199.1-201ENST00000548728 219 ntBASIC-0.19□□□□□ -2.44
HTTP42858 BNIP3P23-201ENST00000599655 511 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AC006213.4-201ENST00000616184 634 ntBASIC-0.19□□□□□ -2.44
HTTP42858 AC008147.4-201ENST00000617570 1204 ntBASIC-0.19□□□□□ -2.44
HTTP42858 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.19□□□□□ -2.44
HTTP42858 AC092447.10-201ENST00000620607 1652 ntBASIC-0.19□□□□□ -2.44
HTTP42858 RNA5SP258-201ENST00000362750 119 ntBASIC-0.2□□□□□ -2.44
HTTP42858 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
HTTP42858 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.2□□□□□ -2.44
HTTP42858 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.2□□□□□ -2.44
HTTP42858 AL512844.2-201ENST00000433990 593 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.2□□□□□ -2.44
HTTP42858 BUD31P2-201ENST00000449374 300 ntBASIC-0.2□□□□□ -2.44
HTTP42858 U7.7-201ENST00000459276 60 ntBASIC-0.2□□□□□ -2.44
HTTP42858 HMGB1P30-201ENST00000492455 606 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.2□□□□□ -2.44
HTTP42858 CR383656.7-201ENST00000548164 174 ntBASIC-0.2□□□□□ -2.44
HTTP42858 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC025627.3-201ENST00000582078 182 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC022432.1-201ENST00000595739 310 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC064807.4-201ENST00000607201 407 ntBASIC-0.2□□□□□ -2.44
HTTP42858 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AP000943.4-201ENST00000622912 357 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.2□□□□□ -2.44
HTTP42858 TAF9BP2-201ENST00000400856 499 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.2□□□□□ -2.44
HTTP42858 AC011233.1-201ENST00000422812 283 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms