Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL161756.2-201ENST00000604597 246 ntBASIC2.56□□□□□ -2
APOBEC1P41238 Y_RNA.804-201ENST00000615262 101 ntBASIC2.56□□□□□ -2
APOBEC1P41238 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.56□□□□□ -2
APOBEC1P41238 AL359854.1-201ENST00000614203 1594 ntBASIC2.56□□□□□ -2
APOBEC1P41238 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBEC1P41238 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
APOBEC1P41238 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBEC1P41238 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBEC1P41238 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBEC1P41238 RNU6-1317P-201ENST00000364582 104 ntBASIC2.55□□□□□ -2
APOBEC1P41238 Y_RNA.263-201ENST00000364659 114 ntBASIC2.55□□□□□ -2
APOBEC1P41238 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC1P41238 Z98742.2-201ENST00000431564 187 ntBASIC2.55□□□□□ -2
APOBEC1P41238 FABP5P14-201ENST00000437273 393 ntBASIC2.55□□□□□ -2
APOBEC1P41238 RPS29P6-201ENST00000438196 145 ntBASIC2.55□□□□□ -2
APOBEC1P41238 AC243964.1-201ENST00000441814 261 ntBASIC2.55□□□□□ -2
APOBEC1P41238 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC1P41238 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC1P41238 RNU7-187P-201ENST00000458985 68 ntBASIC2.55□□□□□ -2
APOBEC1P41238 RPS26P21-201ENST00000475397 348 ntBASIC2.55□□□□□ -2
APOBEC1P41238 RPS29P26-201ENST00000477483 171 ntBASIC2.55□□□□□ -2
APOBEC1P41238 RPL36AP48-201ENST00000485521 314 ntBASIC2.55□□□□□ -2
APOBEC1P41238 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC1P41238 SNORA31.6-201ENST00000516241 130 ntBASIC2.55□□□□□ -2
APOBEC1P41238 SNORA9.3-201ENST00000516383 129 ntBASIC2.55□□□□□ -2
APOBEC1P41238 RNU1-54P-201ENST00000517181 120 ntBASIC2.55□□□□□ -2
APOBEC1P41238 AC105029.1-201ENST00000520250 669 ntBASIC2.55□□□□□ -2
APOBEC1P41238 AC007536.1-201ENST00000533382 349 ntBASIC2.55□□□□□ -2
APOBEC1P41238 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC1P41238 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.55□□□□□ -2
APOBEC1P41238 AC090897.2-201ENST00000581715 130 ntBASIC2.55□□□□□ -2
APOBEC1P41238 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
APOBEC1P41238 MIR4765-201ENST00000585007 77 ntBASIC2.55□□□□□ -2
APOBEC1P41238 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC1P41238 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBEC1P41238 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC1P41238 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
APOBEC1P41238 MIR7515-201ENST00000637837 67 ntBASIC2.55□□□□□ -2
APOBEC1P41238 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC1P41238 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.55□□□□□ -2
APOBEC1P41238 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBEC1P41238 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBEC1P41238 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
APOBEC1P41238 SNORA68.1-201ENST00000364537 132 ntBASIC2.54□□□□□ -2
APOBEC1P41238 Y_RNA.339-201ENST00000365325 102 ntBASIC2.54□□□□□ -2
APOBEC1P41238 RNU6-790P-201ENST00000384479 105 ntBASIC2.54□□□□□ -2
APOBEC1P41238 MIR544A-201ENST00000384855 91 ntBASIC2.54□□□□□ -2
APOBEC1P41238 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC1P41238 RPL37P10-201ENST00000412884 288 ntBASIC2.54□□□□□ -2
APOBEC1P41238 SAR1AP4-201ENST00000429225 591 ntBASIC2.54□□□□□ -2
APOBEC1P41238 RPS3AP52-201ENST00000435639 297 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.54□□□□□ -2
APOBEC1P41238 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
APOBEC1P41238 RNU6-612P-201ENST00000516909 102 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC1P41238 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
APOBEC1P41238 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.54□□□□□ -2
APOBEC1P41238 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC1P41238 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBEC1P41238 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.54□□□□□ -2
APOBEC1P41238 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
APOBEC1P41238 LARP7P1-201ENST00000605576 316 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AC019193.3-201ENST00000609144 554 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AL161423.1-201ENST00000613700 262 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AC007792.1-201ENST00000623023 402 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AC099654.5-201ENST00000636479 350 ntBASIC2.54□□□□□ -2
APOBEC1P41238 AC241585.2-209ENST00000638217 143 ntBASIC2.54□□□□□ -2
APOBEC1P41238 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOBEC1P41238 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.54□□□□□ -2
APOBEC1P41238 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
APOBEC1P41238 AC010329.5-201ENST00000623497 2174 ntBASIC2.53□□□□□ -2
APOBEC1P41238 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.53□□□□□ -2
APOBEC1P41238 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
APOBEC1P41238 AL355596.1-201ENST00000565399 3996 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC002543.1-201ENST00000299783 1954 ntBASIC2.53□□□□□ -2
APOBEC1P41238 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOBEC1P41238 Y_RNA.151-201ENST00000363566 112 ntBASIC2.53□□□□□ -2
APOBEC1P41238 MIR181A2-201ENST00000384863 110 ntBASIC2.53□□□□□ -2
APOBEC1P41238 MT-TD-201ENST00000387419 68 ntBASIC2.53□□□□□ -2
APOBEC1P41238 SNORA48.2-201ENST00000390926 124 ntBASIC2.53□□□□□ -2
APOBEC1P41238 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
APOBEC1P41238 RN7SKP158-201ENST00000410453 326 ntBASIC2.53□□□□□ -2
APOBEC1P41238 RPL23AP83-201ENST00000434984 473 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC1P41238 AC112771.1-201ENST00000463581 102 ntBASIC2.53□□□□□ -2
APOBEC1P41238 RN7SL499P-201ENST00000481141 276 ntBASIC2.53□□□□□ -2
APOBEC1P41238 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
APOBEC1P41238 RNU6-56P-201ENST00000516986 93 ntBASIC2.53□□□□□ -2
APOBEC1P41238 SNORA31.26-201ENST00000517250 137 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC109329.1-201ENST00000518744 317 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
APOBEC1P41238 AP005902.1-201ENST00000521358 186 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC1P41238 CPDP1-201ENST00000579660 283 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AP001836.1-201ENST00000604675 523 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AL356157.2-201ENST00000605122 111 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC018889.1-201ENST00000605372 397 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AC124303.1-201ENST00000605703 360 ntBASIC2.53□□□□□ -2
APOBEC1P41238 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.53□□□□□ -2
APOBEC1P41238 AL133215.3-201ENST00000609801 448 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms