Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL606534.2-204ENST00000635008 178 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 U6.98-201ENST00000637157 84 ntBASIC3.33□□□□□ -1.88
SLC6A4P31645 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A4P31645 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A4P31645 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
SLC6A4P31645 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A4P31645 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A4P31645 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SLC6A4P31645 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 Y_RNA.314-201ENST00000365114 102 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 RNU1-100P-201ENST00000365255 165 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SLC6A4P31645 RNU6-700P-201ENST00000391043 107 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 MTCYBP2-201ENST00000407745 171 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 RNU6-1156P-201ENST00000410365 100 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 RNU4-47P-201ENST00000410876 114 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A4P31645 AC007098.1-201ENST00000420122 367 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A4P31645 BPY2DP-201ENST00000422208 265 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC6A4P31645 MTND3P9-201ENST00000429526 346 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 ARF4P2-201ENST00000430209 526 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AL353997.1-201ENST00000432936 108 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A4P31645 SETP5-201ENST00000437270 562 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AC006028.1-201ENST00000438379 402 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A4P31645 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A4P31645 AP001486.1-201ENST00000463339 476 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 RPS29P27-201ENST00000463711 170 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 RPL30P10-201ENST00000488148 337 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 RNU6-764P-201ENST00000516396 105 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC6A4P31645 CR383656.8-201ENST00000549046 145 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 7SK.7-201ENST00000603504 247 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 AC009318.2-201ENST00000610917 651 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 HMGB1P24-202ENST00000615653 685 ntBASIC3.32□□□□□ -1.88
SLC6A4P31645 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A4P31645 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SLC6A4P31645 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SLC6A4P31645 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A4P31645 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC6A4P31645 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC6A4P31645 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
SLC6A4P31645 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SLC6A4P31645 RNU6-99P-201ENST00000364721 107 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 RNU6-1280P-201ENST00000365211 107 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC6A4P31645 SNORA48.5-201ENST00000391143 135 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC113618.1-201ENST00000416747 285 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A4P31645 AL160004.2-201ENST00000432935 350 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A4P31645 RN7SKP210-201ENST00000459176 261 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC6A4P31645 AC006445.1-201ENST00000491925 405 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC6A4P31645 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A4P31645 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A4P31645 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A4P31645 RNU6-120P-201ENST00000516077 103 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC144568.1-201ENST00000520139 137 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC021739.1-201ENST00000559631 174 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 MIR5701-3-201ENST00000578890 82 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 MIR5701-1-201ENST00000585138 82 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A4P31645 MIR5701-2-201ENST00000615634 82 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC024581.2-201ENST00000619986 252 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AL162373.1-201ENST00000620433 407 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A4P31645 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A4P31645 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC6A4P31645 HAUS6P2-201ENST00000433254 2404 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC6A4P31645 ADAM3A-203ENST00000461344 2157 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 AC008669.1-201ENST00000565823 2178 ntBASIC3.31□□□□□ -1.88
SLC6A4P31645 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC6A4P31645 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A4P31645 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A4P31645 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A4P31645 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A4P31645 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 Y_RNA.48-201ENST00000362710 103 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 Y_RNA.455-201ENST00000384230 98 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC6A4P31645 AL358176.2-201ENST00000425769 204 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC6A4P31645 HMGN2P20-201ENST00000437531 273 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
SLC6A4P31645 RNU4-77P-201ENST00000516692 156 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms