Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNGA1P29973 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CNGA1P29973 RNU6-227P-201ENST00000362865 103 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 RNU6-1188P-201ENST00000363795 107 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 SAR1AP2-201ENST00000392696 594 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 AL512633.1-201ENST00000399931 655 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 RNU6-1245P-201ENST00000411130 106 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 AP001324.2-201ENST00000461163 319 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 RPL31P41-201ENST00000477967 372 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 Y_RNA.708-201ENST00000516950 96 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.64□□□□□ -1.83
CNGA1P29973 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 AC011494.1-201ENST00000596454 237 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 AC078795.3-201ENST00000602913 472 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.64□□□□□ -1.83
CNGA1P29973 AC069234.5-201ENST00000611056 416 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.64□□□□□ -1.83
CNGA1P29973 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.64□□□□□ -1.83
CNGA1P29973 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNGA1P29973 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.64□□□□□ -1.83
CNGA1P29973 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNGA1P29973 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.63□□□□□ -1.83
CNGA1P29973 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNGA1P29973 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.63□□□□□ -1.83
CNGA1P29973 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 RNU1-70P-201ENST00000362618 164 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 RNU6-596P-201ENST00000365395 98 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 Y_RNA.594-201ENST00000410373 140 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 RNU6-1050P-201ENST00000410388 107 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 RPL23AP22-201ENST00000437556 453 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.63□□□□□ -1.83
CNGA1P29973 MTND4LP22-201ENST00000508209 276 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 SNORA31.6-201ENST00000516241 130 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 Y_RNA.670-201ENST00000516255 105 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 Y_RNA.718-201ENST00000517110 102 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.63□□□□□ -1.83
CNGA1P29973 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.63□□□□□ -1.83
CNGA1P29973 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.63□□□□□ -1.83
CNGA1P29973 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.63□□□□□ -1.83
CNGA1P29973 RPS15AP11-201ENST00000594193 385 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.63□□□□□ -1.83
CNGA1P29973 AC007496.3-201ENST00000624987 3443 ntBASIC3.63□□□□□ -1.83
CNGA1P29973 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.62□□□□□ -1.83
CNGA1P29973 MIR449A-201ENST00000362113 91 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 Y_RNA.11-201ENST00000362375 109 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 U3.6-201ENST00000363622 211 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 RNU6-1059P-201ENST00000363752 98 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 RNA5SP126-201ENST00000365092 109 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 RNU6-842P-201ENST00000384269 107 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 RNY4P36-201ENST00000391116 96 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 MTCYBP4-201ENST00000401524 249 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 MTND4P28-201ENST00000426217 387 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 MTND3P9-201ENST00000429526 346 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 AL353705.1-201ENST00000433468 480 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 AC236972.2-201ENST00000434979 310 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.62□□□□□ -1.83
CNGA1P29973 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.62□□□□□ -1.83
CNGA1P29973 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.62□□□□□ -1.83
CNGA1P29973 SCARNA17.1-201ENST00000516211 143 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 SCARNA17.2-201ENST00000516334 143 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 AC068657.1-201ENST00000520807 306 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.62□□□□□ -1.83
CNGA1P29973 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.62□□□□□ -1.83
CNGA1P29973 MIR4672-201ENST00000583126 81 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 AC009229.3-201ENST00000608056 282 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 uc_338.1-201ENST00000612113 180 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 SCARNA17.4-201ENST00000614296 143 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 MTND4LP32-201ENST00000636111 270 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 AL669831.3-213ENST00000636676 183 ntBASIC3.62□□□□□ -1.83
CNGA1P29973 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CNGA1P29973 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.62□□□□□ -1.83
CNGA1P29973 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNGA1P29973 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CNGA1P29973 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.61□□□□□ -1.83
CNGA1P29973 SNORA71.1-201ENST00000364523 117 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 Y_RNA.259-201ENST00000364619 101 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 SNORD32A-201ENST00000364805 84 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 MIR521-1-201ENST00000384902 87 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 SNORA75.4-201ENST00000391278 119 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 AL133475.1-201ENST00000404414 305 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 AL031659.1-201ENST00000447075 539 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.61□□□□□ -1.83
CNGA1P29973 ACA59.1-201ENST00000515966 143 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 SCARNA11.3-201ENST00000517276 130 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.61□□□□□ -1.83
CNGA1P29973 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.61□□□□□ -1.83
CNGA1P29973 AL356157.2-201ENST00000605122 111 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 AL050343.2-201ENST00000607338 280 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CNGA1P29973 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
CNGA1P29973 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.61□□□□□ -1.83
CNGA1P29973 AL109809.4-201ENST00000603520 2185 ntBASIC3.61□□□□□ -1.83
CNGA1P29973 AC006026.1-201ENST00000444025 1803 ntBASIC3.6□□□□□ -1.83
CNGA1P29973 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms