Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC004854.1-201ENST00000440356 349 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A5P29400 PRELID3BP1-201ENST00000457142 540 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC018868.1-201ENST00000491307 315 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 SUMO2P5-201ENST00000506790 245 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-64P-201ENST00000517119 105 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
COL4A5P29400 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.88□□□□□ -2.27
COL4A5P29400 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COL4A5P29400 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A5P29400 MIR4422-201ENST00000581938 83 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC005786.1-201ENST00000588553 154 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC009229.3-201ENST00000608056 282 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL136313.1-201ENST00000624804 202 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.88□□□□□ -2.27
COL4A5P29400 Y_RNA.280-201ENST00000364765 112 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-16P-201ENST00000384385 107 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-1235P-201ENST00000384559 107 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-360P-201ENST00000390944 104 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC119751.3-201ENST00000399720 670 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC009310.1-201ENST00000414414 451 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A5P29400 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.88□□□□□ -2.27
COL4A5P29400 TIMM9P1-201ENST00000436122 256 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-498P-201ENST00000459468 107 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AP001025.1-201ENST00000486139 332 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.88□□□□□ -2.27
COL4A5P29400 CYCSP27-201ENST00000527643 293 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AC008269.2-201ENST00000561915 1105 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL355472.4-201ENST00000610233 626 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL365204.3-201ENST00000612448 685 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.88□□□□□ -2.27
COL4A5P29400 AC093648.1-201ENST00000623546 606 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 MIR3529-201ENST00000637713 78 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 FARSBP1-201ENST00000435808 1778 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 Y_RNA.110-201ENST00000363220 99 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU1-23P-201ENST00000363361 144 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 Y_RNA.412-201ENST00000384001 104 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU6-166P-201ENST00000384371 107 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 SNORD14D-201ENST00000384390 87 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 MIR518D-201ENST00000385014 87 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU6-1025P-201ENST00000410629 104 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU2-48P-201ENST00000410694 191 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AC008267.5-201ENST00000424928 265 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.87□□□□□ -2.27
COL4A5P29400 AC003071.1-201ENST00000451219 789 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.87□□□□□ -2.27
COL4A5P29400 AK3P2-201ENST00000507976 429 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AC067942.3-201ENST00000512025 362 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU6-970P-201ENST00000516312 107 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU2-10P-201ENST00000516375 211 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 RNU6-667P-201ENST00000517186 102 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AC009902.1-201ENST00000519351 183 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.87□□□□□ -2.27
COL4A5P29400 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.87□□□□□ -2.27
COL4A5P29400 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.87□□□□□ -2.27
COL4A5P29400 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.87□□□□□ -2.27
COL4A5P29400 MIR4293-201ENST00000584305 78 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AC073544.2-201ENST00000601155 540 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AC016925.2-201ENST00000605108 242 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 AC092656.1-203ENST00000624134 423 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 Z99571.1-201ENST00000636677 394 ntBASIC0.87□□□□□ -2.27
COL4A5P29400 ZNF680P1-201ENST00000436625 1469 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL4A5P29400 RNU6-622P-201ENST00000384272 103 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 RNU6-160P-201ENST00000384591 107 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL4A5P29400 MIR1262-201ENST00000408276 93 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 RNU2-23P-201ENST00000410545 195 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 AL627311.1-201ENST00000431514 115 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 MTCO1P27-201ENST00000448269 226 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A5P29400 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A5P29400 AC117454.1-201ENST00000491120 168 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 SNORA31.19-201ENST00000517079 126 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 RN7SKP256-201ENST00000517201 314 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A5P29400 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A5P29400 AL157871.3-201ENST00000557231 293 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.86□□□□□ -2.27
COL4A5P29400 AC012065.4-201ENST00000602445 679 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 DPPA3P3-201ENST00000603842 430 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 AL132822.1-201ENST00000617063 513 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A5P29400 AL356596.1-201ENST00000624230 379 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A5P29400 OR4G3P-201ENST00000633500 913 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 AC099654.8-201ENST00000637757 681 ntBASIC0.86□□□□□ -2.27
COL4A5P29400 RNU6-1010P-201ENST00000362757 107 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 Y_RNA.67-201ENST00000362870 100 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 UBE2V1P10-201ENST00000414685 269 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A5P29400 Y_RNA.689-201ENST00000516589 107 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AP006587.4-201ENST00000526053 529 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.85□□□□□ -2.27
COL4A5P29400 AL160236.1-201ENST00000556317 195 ntBASIC0.85□□□□□ -2.27
COL4A5P29400 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms