Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.37□□□□□ -1.87
CTGFP29279 OR56A5-201ENST00000340110 738 ntBASIC3.37□□□□□ -1.87
CTGFP29279 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
CTGFP29279 Y_RNA.180-201ENST00000363867 113 ntBASIC3.37□□□□□ -1.87
CTGFP29279 Y_RNA.274-201ENST00000364714 101 ntBASIC3.37□□□□□ -1.87
CTGFP29279 MIR3074-201ENST00000384885 81 ntBASIC3.37□□□□□ -1.87
CTGFP29279 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
CTGFP29279 AC243428.1-201ENST00000421099 264 ntBASIC3.37□□□□□ -1.87
CTGFP29279 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
CTGFP29279 Z82210.1-201ENST00000440037 231 ntBASIC3.37□□□□□ -1.87
CTGFP29279 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.37□□□□□ -1.87
CTGFP29279 AC114801.2-201ENST00000503825 781 ntBASIC3.37□□□□□ -1.87
CTGFP29279 RNU6-1023P-201ENST00000516137 106 ntBASIC3.37□□□□□ -1.87
CTGFP29279 MIR892C-201ENST00000516410 77 ntBASIC3.37□□□□□ -1.87
CTGFP29279 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
CTGFP29279 RNA5SP468-201ENST00000516782 93 ntBASIC3.37□□□□□ -1.87
CTGFP29279 RNU1-54P-201ENST00000517181 120 ntBASIC3.37□□□□□ -1.87
CTGFP29279 OR5D17P-201ENST00000531492 978 ntBASIC3.37□□□□□ -1.87
CTGFP29279 MIR3690-201ENST00000580266 75 ntBASIC3.37□□□□□ -1.87
CTGFP29279 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
CTGFP29279 AC006023.2-201ENST00000609916 167 ntBASIC3.37□□□□□ -1.87
CTGFP29279 MIR6128-201ENST00000615528 109 ntBASIC3.37□□□□□ -1.87
CTGFP29279 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.37□□□□□ -1.87
CTGFP29279 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CTGFP29279 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTGFP29279 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTGFP29279 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTGFP29279 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTGFP29279 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTGFP29279 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTGFP29279 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CTGFP29279 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
CTGFP29279 MIR412-201ENST00000362142 91 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU6-50P-201ENST00000362356 103 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU6-200P-201ENST00000364743 107 ntBASIC3.36□□□□□ -1.87
CTGFP29279 SNORA20.1-201ENST00000364790 130 ntBASIC3.36□□□□□ -1.87
CTGFP29279 Y_RNA.324-201ENST00000365165 102 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNA5SP240-201ENST00000365355 128 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU1-89P-201ENST00000384592 164 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU6-328P-201ENST00000390887 106 ntBASIC3.36□□□□□ -1.87
CTGFP29279 MIR887-201ENST00000401258 79 ntBASIC3.36□□□□□ -1.87
CTGFP29279 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.36□□□□□ -1.87
CTGFP29279 ELOCP20-201ENST00000422460 345 ntBASIC3.36□□□□□ -1.87
CTGFP29279 UBE2D3P2-201ENST00000424409 445 ntBASIC3.36□□□□□ -1.87
CTGFP29279 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.36□□□□□ -1.87
CTGFP29279 AL513124.1-201ENST00000450410 614 ntBASIC3.36□□□□□ -1.87
CTGFP29279 AC011005.2-201ENST00000487324 359 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU1-86P-201ENST00000516108 154 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU1-107P-201ENST00000516617 154 ntBASIC3.36□□□□□ -1.87
CTGFP29279 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
CTGFP29279 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.36□□□□□ -1.87
CTGFP29279 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CTGFP29279 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.36□□□□□ -1.87
CTGFP29279 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.36□□□□□ -1.87
CTGFP29279 AC130289.1-201ENST00000577321 73 ntBASIC3.36□□□□□ -1.87
CTGFP29279 RNU6-85P-201ENST00000605989 107 ntBASIC3.36□□□□□ -1.87
CTGFP29279 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.36□□□□□ -1.87
CTGFP29279 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTGFP29279 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 SNORD62.1-201ENST00000362541 86 ntBASIC3.35□□□□□ -1.87
CTGFP29279 SNORD3E-201ENST00000362899 217 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNU6-1059P-201ENST00000363752 98 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNY3P11-201ENST00000364153 102 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNU6-1329P-201ENST00000365664 107 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNU6-338P-201ENST00000383888 105 ntBASIC3.35□□□□□ -1.87
CTGFP29279 Y_RNA.506-201ENST00000384494 102 ntBASIC3.35□□□□□ -1.87
CTGFP29279 Y_RNA.539-201ENST00000384635 107 ntBASIC3.35□□□□□ -1.87
CTGFP29279 MIR34A-201ENST00000385130 110 ntBASIC3.35□□□□□ -1.87
CTGFP29279 MIR493-201ENST00000385254 89 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNA5SP239-201ENST00000410218 129 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNU6-293P-201ENST00000411259 106 ntBASIC3.35□□□□□ -1.87
CTGFP29279 PGBD4P6-201ENST00000421501 610 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.35□□□□□ -1.87
CTGFP29279 FTH1P6-201ENST00000430768 320 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AL645568.3-201ENST00000433683 316 ntBASIC3.35□□□□□ -1.87
CTGFP29279 OSTCP8-201ENST00000445117 448 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.35□□□□□ -1.87
CTGFP29279 NDUFB1P2-201ENST00000449477 176 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AC092436.3-201ENST00000511788 257 ntBASIC3.35□□□□□ -1.87
CTGFP29279 RNU6-470P-201ENST00000515954 104 ntBASIC3.35□□□□□ -1.87
CTGFP29279 IGHV3-76-201ENST00000522465 295 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AC012433.1-201ENST00000588916 398 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AC010620.2-201ENST00000600135 313 ntBASIC3.35□□□□□ -1.87
CTGFP29279 AC024153.1-201ENST00000603103 365 ntBASIC3.35□□□□□ -1.87
CTGFP29279 ELOCP5-201ENST00000604924 333 ntBASIC3.35□□□□□ -1.87
CTGFP29279 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.35□□□□□ -1.87
CTGFP29279 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 AP003122.5-201ENST00000527668 3766 ntBASIC3.35□□□□□ -1.87
CTGFP29279 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTGFP29279 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTGFP29279 Y_RNA.214-201ENST00000364201 112 ntBASIC3.34□□□□□ -1.87
CTGFP29279 RNU6-886P-201ENST00000384319 105 ntBASIC3.34□□□□□ -1.87
CTGFP29279 Y_RNA.515-201ENST00000384535 112 ntBASIC3.34□□□□□ -1.87
CTGFP29279 SNORA67.4-201ENST00000384688 142 ntBASIC3.34□□□□□ -1.87
CTGFP29279 Y_RNA.562-201ENST00000384695 113 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms