Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RFX1P22670 RNA5SP295-201ENST00000362655 121 ntBASIC4.62□□□□□ -1.67
RFX1P22670 RNU6-626P-201ENST00000363354 107 ntBASIC4.62□□□□□ -1.67
RFX1P22670 RNU4-56P-201ENST00000364700 142 ntBASIC4.62□□□□□ -1.67
RFX1P22670 RNA5SP283-201ENST00000365604 119 ntBASIC4.62□□□□□ -1.67
RFX1P22670 AL445305.1-201ENST00000432577 575 ntBASIC4.62□□□□□ -1.67
RFX1P22670 AC112220.1-201ENST00000434628 355 ntBASIC4.62□□□□□ -1.67
RFX1P22670 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RFX1P22670 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.62□□□□□ -1.67
RFX1P22670 AL136097.1-201ENST00000456945 913 ntBASIC4.62□□□□□ -1.67
RFX1P22670 snoU13.14-201ENST00000459372 104 ntBASIC4.62□□□□□ -1.67
RFX1P22670 AC073901.1-201ENST00000462471 408 ntBASIC4.62□□□□□ -1.67
RFX1P22670 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.62□□□□□ -1.67
RFX1P22670 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX1P22670 SNORA31.16-201ENST00000516773 139 ntBASIC4.62□□□□□ -1.67
RFX1P22670 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX1P22670 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.62□□□□□ -1.67
RFX1P22670 RRN3P3-201ENST00000549207 578 ntBASIC4.62□□□□□ -1.67
RFX1P22670 MIR4643-201ENST00000577473 78 ntBASIC4.62□□□□□ -1.67
RFX1P22670 RPS15AP11-201ENST00000594193 385 ntBASIC4.62□□□□□ -1.67
RFX1P22670 U2.14-201ENST00000615943 113 ntBASIC4.62□□□□□ -1.67
RFX1P22670 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX1P22670 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX1P22670 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.62□□□□□ -1.67
RFX1P22670 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RFX1P22670 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX1P22670 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX1P22670 GABRG2-229ENST00000641017 3628 ntBASIC4.61□□□□□ -1.67
RFX1P22670 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 MIR331-201ENST00000362302 94 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNA5SP197-201ENST00000363357 119 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNA5SP387-201ENST00000364226 106 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNU6-326P-201ENST00000365480 107 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNU6-245P-201ENST00000384020 107 ntBASIC4.61□□□□□ -1.67
RFX1P22670 EI24P2-201ENST00000397776 1076 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNU6ATAC-201ENST00000408749 126 ntBASIC4.61□□□□□ -1.67
RFX1P22670 CYCSP19-201ENST00000411715 316 ntBASIC4.61□□□□□ -1.67
RFX1P22670 AL139156.1-201ENST00000412785 841 ntBASIC4.61□□□□□ -1.67
RFX1P22670 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.61□□□□□ -1.67
RFX1P22670 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX1P22670 AC007395.1-201ENST00000451333 677 ntBASIC4.61□□□□□ -1.67
RFX1P22670 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX1P22670 SNORA31.1-201ENST00000515993 133 ntBASIC4.61□□□□□ -1.67
RFX1P22670 SNORA31.5-201ENST00000516190 133 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
RFX1P22670 RNA5SP360-201ENST00000516555 118 ntBASIC4.61□□□□□ -1.67
RFX1P22670 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.61□□□□□ -1.67
RFX1P22670 AC012493.2-201ENST00000595083 291 ntBASIC4.61□□□□□ -1.67
RFX1P22670 AL391813.1-201ENST00000603098 260 ntBASIC4.61□□□□□ -1.67
RFX1P22670 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.61□□□□□ -1.67
RFX1P22670 AC010999.1-201ENST00000611856 324 ntBASIC4.61□□□□□ -1.67
RFX1P22670 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.61□□□□□ -1.67
RFX1P22670 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 AF127577.6-201ENST00000623352 2191 ntBASIC4.61□□□□□ -1.67
RFX1P22670 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RFX1P22670 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RFX1P22670 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFX1P22670 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RFX1P22670 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX1P22670 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.6□□□□□ -1.67
RFX1P22670 Y_RNA.29-201ENST00000362570 113 ntBASIC4.6□□□□□ -1.67
RFX1P22670 Y_RNA.274-201ENST00000364714 101 ntBASIC4.6□□□□□ -1.67
RFX1P22670 Y_RNA.286-201ENST00000364813 102 ntBASIC4.6□□□□□ -1.67
RFX1P22670 RNU6-1062P-201ENST00000383908 107 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX1P22670 AC017079.2-201ENST00000416102 485 ntBASIC4.6□□□□□ -1.67
RFX1P22670 PIGPP3-201ENST00000425307 415 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AL365496.1-201ENST00000426885 215 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AL117339.2-201ENST00000430475 180 ntBASIC4.6□□□□□ -1.67
RFX1P22670 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX1P22670 AL162151.2-201ENST00000448875 158 ntBASIC4.6□□□□□ -1.67
RFX1P22670 RN7SL585P-201ENST00000470538 280 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AC146944.2-203ENST00000502493 354 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AC139495.1-202ENST00000513164 354 ntBASIC4.6□□□□□ -1.67
RFX1P22670 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.6□□□□□ -1.67
RFX1P22670 AC025281.1-201ENST00000567026 265 ntBASIC4.6□□□□□ -1.67
RFX1P22670 AC008739.3-201ENST00000603262 127 ntBASIC4.6□□□□□ -1.67
RFX1P22670 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFX1P22670 MIR6075-201ENST00000620782 95 ntBASIC4.6□□□□□ -1.67
RFX1P22670 SNORD98-201ENST00000636377 67 ntBASIC4.6□□□□□ -1.67
RFX1P22670 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RFX1P22670 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.6□□□□□ -1.67
RFX1P22670 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RFX1P22670 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
RFX1P22670 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RFX1P22670 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX1P22670 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX1P22670 Y_RNA.200-201ENST00000364018 102 ntBASIC4.59□□□□□ -1.67
RFX1P22670 Y_RNA.333-201ENST00000365274 102 ntBASIC4.59□□□□□ -1.67
RFX1P22670 SNORA70.4-201ENST00000365509 134 ntBASIC4.59□□□□□ -1.67
RFX1P22670 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFX1P22670 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX1P22670 RNU6-20P-201ENST00000384106 107 ntBASIC4.59□□□□□ -1.67
RFX1P22670 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms