Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR135A2-201ENST00000384854 100 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-903P-201ENST00000391270 109 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 SUMO2P12-201ENST00000405924 140 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-174P-201ENST00000410406 106 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU2-25P-201ENST00000411041 191 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 ZNF90P2-204ENST00000419323 1075 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.52□□□□□ -2.17
COL5A1P20908 MRPS10P2-201ENST00000431226 381 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.52□□□□□ -2.17
COL5A1P20908 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 MTND2P29-201ENST00000438595 412 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 SEPT14P3-201ENST00000439401 183 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AL732372.2-207ENST00000445840 183 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 MTND4P18-201ENST00000447010 465 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 SEPT14P2-201ENST00000453405 183 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.52□□□□□ -2.17
COL5A1P20908 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.52□□□□□ -2.17
COL5A1P20908 MRPL42P6-201ENST00000486397 371 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AC069439.1-201ENST00000494739 167 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.52□□□□□ -2.17
COL5A1P20908 SEPT14P4-201ENST00000513445 186 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 Y_RNA.689-201ENST00000516589 107 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-1092P-201ENST00000516955 87 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 RNU6-1220P-201ENST00000517126 108 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.52□□□□□ -2.17
COL5A1P20908 AC134698.4-201ENST00000523451 826 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 FO082796.1-201ENST00000523795 183 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 LARP7P1-201ENST00000605576 316 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AP001596.2-201ENST00000608410 312 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 MIR6840-201ENST00000611937 71 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 AL359547.2-201ENST00000615810 418 ntBASIC1.52□□□□□ -2.17
COL5A1P20908 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.52□□□□□ -2.17
COL5A1P20908 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
COL5A1P20908 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL5A1P20908 SNORD56.2-201ENST00000363242 71 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 Y_RNA.205-201ENST00000364128 113 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNY4P16-201ENST00000364768 94 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU4-48P-201ENST00000365559 182 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-641P-201ENST00000384006 107 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 SNORA6-201ENST00000384033 151 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-606P-201ENST00000384721 111 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 MIR454-201ENST00000390180 115 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-1197P-201ENST00000391183 107 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL5A1P20908 RNA5SP38-201ENST00000410750 119 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-1068P-201ENST00000410958 103 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-373P-201ENST00000411247 98 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 MTCO3P12-201ENST00000416718 547 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AL451054.2-201ENST00000420896 202 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 ZNF863P-201ENST00000426746 417 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AL365400.1-201ENST00000431854 640 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 UBBP3-201ENST00000445497 241 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 MTND5P20-201ENST00000448677 143 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RPS15AP27-201ENST00000449183 343 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 MTND3P10-201ENST00000450967 341 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RPS20P20-201ENST00000460498 340 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC010631.1-201ENST00000474150 156 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC090096.1-201ENST00000489168 390 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.51□□□□□ -2.17
COL5A1P20908 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL5A1P20908 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.51□□□□□ -2.17
COL5A1P20908 AL359273.1-201ENST00000510918 627 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-358P-201ENST00000516564 75 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 SNORA31.20-201ENST00000517111 133 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-64P-201ENST00000517119 105 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 OR4R1P-201ENST00000529879 463 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC118273.2-201ENST00000532092 465 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.51□□□□□ -2.17
COL5A1P20908 COX6CP3-201ENST00000580869 223 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.51□□□□□ -2.17
COL5A1P20908 RNU6-89P-201ENST00000606519 100 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AP001330.5-201ENST00000607176 411 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC002553.4-201ENST00000616896 331 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.51□□□□□ -2.17
COL5A1P20908 FRG1KP-201ENST00000623592 341 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 AL008636.1-201ENST00000625038 1018 ntBASIC1.51□□□□□ -2.17
COL5A1P20908 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.5□□□□□ -2.17
COL5A1P20908 DEFB108F-201ENST00000344638 222 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 Y_RNA.89-201ENST00000363031 102 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 Y_RNA.256-201ENST00000364594 104 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 Y_RNA.372-201ENST00000365599 102 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 Y_RNA.409-201ENST00000383990 98 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU6-1074P-201ENST00000383995 104 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU6-39P-201ENST00000384344 107 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU6-1158P-201ENST00000391167 107 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC114491.1-201ENST00000416095 246 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.5□□□□□ -2.17
COL5A1P20908 PPP1R11P2-201ENST00000423543 382 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 C8orf59P1-201ENST00000429930 303 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RPL23AP30-201ENST00000432419 501 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.5□□□□□ -2.17
COL5A1P20908 RPL26P6-201ENST00000440913 438 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC020550.1-201ENST00000447385 163 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms