Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
ERCC3P19447 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERCC3P19447 MFSD8-236ENST00000641509 4050 ntBASIC4.32□□□□□ -1.72
ERCC3P19447 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ERCC3P19447 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERCC3P19447 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ERCC3P19447 AC002543.1-201ENST00000299783 1954 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.31□□□□□ -1.72
ERCC3P19447 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.31□□□□□ -1.72
ERCC3P19447 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ERCC3P19447 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERCC3P19447 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.31□□□□□ -1.72
ERCC3P19447 Y_RNA.645-201ENST00000391229 102 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 SNORA48.8-201ENST00000391324 134 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 SAR1AP2-201ENST00000392696 594 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 RPL23AP95-201ENST00000426806 265 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 AL365496.1-201ENST00000426885 215 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 RAC1P5-201ENST00000512182 576 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 SNORA70.24-201ENST00000517233 118 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.31□□□□□ -1.72
ERCC3P19447 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.31□□□□□ -1.72
ERCC3P19447 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.31□□□□□ -1.72
ERCC3P19447 AC104581.2-201ENST00000572227 430 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 MIR5188-201ENST00000583467 113 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 VN1R91P-201ENST00000594377 169 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 AL391813.1-201ENST00000603098 260 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 SNORA62.6-201ENST00000606322 83 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.31□□□□□ -1.72
ERCC3P19447 AL078596.1-201ENST00000624856 447 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.31□□□□□ -1.72
ERCC3P19447 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ERCC3P19447 AL353743.1-202ENST00000431724 1695 ntBASIC4.31□□□□□ -1.72
ERCC3P19447 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ERCC3P19447 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ERCC3P19447 MTND5P27-201ENST00000428871 1720 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ERCC3P19447 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ERCC3P19447 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.3□□□□□ -1.72
ERCC3P19447 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.3□□□□□ -1.72
ERCC3P19447 RPL36AP48-201ENST00000485521 314 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 RPL22P13-201ENST00000493291 347 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 RAC1P2-201ENST00000511164 579 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 SNORA74D-201ENST00000516404 141 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.3□□□□□ -1.72
ERCC3P19447 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.3□□□□□ -1.72
ERCC3P19447 AC008269.2-201ENST00000561915 1105 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.3□□□□□ -1.72
ERCC3P19447 AC010928.2-201ENST00000588017 287 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 RPS29P30-201ENST00000600975 111 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.3□□□□□ -1.72
ERCC3P19447 SCARNA4-201ENST00000629045 128 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 SNORA43.4-201ENST00000629559 138 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 AC110079.1-202ENST00000635213 138 ntBASIC4.3□□□□□ -1.72
ERCC3P19447 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.3□□□□□ -1.72
ERCC3P19447 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ERCC3P19447 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ERCC3P19447 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC3P19447 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.29□□□□□ -1.72
ERCC3P19447 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC3P19447 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC3P19447 RNU6-874P-201ENST00000362390 105 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 Y_RNA.106-201ENST00000363189 100 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 SNORA51.11-201ENST00000384442 131 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 AC078809.1-201ENST00000427601 140 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 Z98742.2-201ENST00000431564 187 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.29□□□□□ -1.72
ERCC3P19447 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.29□□□□□ -1.72
ERCC3P19447 snoU13.6-201ENST00000458785 104 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 AF186996.7-201ENST00000492781 209 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.29□□□□□ -1.72
ERCC3P19447 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.29□□□□□ -1.72
ERCC3P19447 MIR3186-201ENST00000577404 85 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 AL137843.1-201ENST00000605078 385 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 RPL23AP88-201ENST00000605759 454 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC3P19447 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.29□□□□□ -1.72
ERCC3P19447 AC110774.1-201ENST00000623567 2018 ntBASIC4.29□□□□□ -1.72
ERCC3P19447 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC3P19447 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC3P19447 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ERCC3P19447 AL353746.1-201ENST00000566293 6881 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.28□□□□□ -1.72
ERCC3P19447 AC092268.1-201ENST00000342691 405 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RNU6-1159P-201ENST00000362933 107 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RNU6-799P-201ENST00000363567 107 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RNA5SP139-201ENST00000364340 117 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RNU4-56P-201ENST00000364700 142 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RNU6-1027P-201ENST00000383998 107 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 Y_RNA.592-201ENST00000410274 109 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RN7SKP61-201ENST00000410642 295 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 MTND3P2-201ENST00000438452 342 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 OSTCP8-201ENST00000445117 448 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC3P19447 MRPS36P2-201ENST00000512569 299 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 RNU6-475P-201ENST00000516073 104 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 AC115990.1-201ENST00000526957 301 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 AC040926.1-201ENST00000530195 238 ntBASIC4.28□□□□□ -1.72
ERCC3P19447 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms