Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPRAP18433 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTPRAP18433 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPRAP18433 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTPRAP18433 AC000123.3-201ENST00000624029 4975 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRAP18433 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRAP18433 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRAP18433 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PTPRAP18433 SNORD9-201ENST00000362566 104 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 RNU6-942P-201ENST00000363002 107 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 RNU6-961P-201ENST00000363893 105 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 Y_RNA.319-201ENST00000365138 92 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 SNORD50.2-201ENST00000365465 70 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 Y_RNA.398-201ENST00000383952 99 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 U8.10-201ENST00000384260 133 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 MIR518D-201ENST00000385014 87 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 MIR325-201ENST00000385260 98 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 RNU6-1245P-201ENST00000411130 106 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 MRPS10P1-201ENST00000448483 130 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 RPL23AP3-201ENST00000453844 468 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 AC006026.2-201ENST00000457376 180 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 RPL31P61-201ENST00000496160 376 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 RNU6-703P-201ENST00000516946 107 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPRAP18433 ZNF192P1-203ENST00000565888 810 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPRAP18433 KLKP1-201ENST00000595979 403 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 AL365265.1-201ENST00000621045 234 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 BMS1P21-201ENST00000634565 365 ntBASIC4.35□□□□□ -1.71
PTPRAP18433 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PTPRAP18433 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPRAP18433 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PTPRAP18433 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPRAP18433 AC008568.2-201ENST00000623862 2313 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPRAP18433 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
PTPRAP18433 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPRAP18433 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPRAP18433 UBE2WP1-201ENST00000362030 340 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 SNORD32A-201ENST00000364805 84 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-1175P-201ENST00000365200 107 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-281P-201ENST00000384212 103 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-1035P-201ENST00000384477 107 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-1081P-201ENST00000384537 107 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-140P-201ENST00000384566 108 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-658P-201ENST00000384606 106 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-394P-201ENST00000410735 107 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNU6-1219P-201ENST00000516143 112 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 RNA5SP208-201ENST00000516156 78 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 SNORA27.4-201ENST00000516650 95 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPRAP18433 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPRAP18433 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPRAP18433 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPRAP18433 SNORA43.4-201ENST00000629559 138 ntBASIC4.34□□□□□ -1.71
PTPRAP18433 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
PTPRAP18433 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTPRAP18433 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PTPRAP18433 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPRAP18433 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
PTPRAP18433 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRAP18433 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRAP18433 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRAP18433 RNU5B-2P-201ENST00000363036 113 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 MIR329-1-201ENST00000385028 80 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 HLFP1-201ENST00000402375 499 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPRAP18433 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRAP18433 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPRAP18433 LINC00933-203ENST00000559812 219 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRAP18433 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 AL137849.1-201ENST00000604767 169 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 AP001485.1-201ENST00000604799 199 ntBASIC4.33□□□□□ -1.72
PTPRAP18433 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
PTPRAP18433 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PTPRAP18433 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPRAP18433 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPRAP18433 FTLP6-201ENST00000355274 422 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 RNA5SP50-201ENST00000363731 107 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 RNU1-140P-201ENST00000365040 165 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 Y_RNA.308-201ENST00000365043 101 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 RNA5SP424-201ENST00000390988 115 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 SNORA46.1-201ENST00000391069 153 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 SETP5-201ENST00000437270 562 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 POLR2KP2-201ENST00000438155 177 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPRAP18433 BX510359.1-201ENST00000456973 237 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 SNORD2.1-201ENST00000458762 69 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPRAP18433 RNU1-103P-201ENST00000516502 125 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 SCARNA13-201ENST00000516672 275 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 AL391261.3-201ENST00000557194 520 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 AC090877.1-201ENST00000561418 344 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 MIR4308-201ENST00000580634 81 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 AC073349.3-201ENST00000617616 186 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 AC024581.2-201ENST00000619986 252 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 AC006001.4-201ENST00000622243 395 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms