Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.91□□□□□ -1.78
ITGA4P13612 AC090617.3-201ENST00000573670 475 ntBASIC3.91□□□□□ -1.78
ITGA4P13612 AL451007.1-201ENST00000595491 289 ntBASIC3.91□□□□□ -1.78
ITGA4P13612 RPL23AP88-201ENST00000605759 454 ntBASIC3.91□□□□□ -1.78
ITGA4P13612 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.91□□□□□ -1.78
ITGA4P13612 AC024581.2-201ENST00000619986 252 ntBASIC3.91□□□□□ -1.78
ITGA4P13612 SDR42E1P4-201ENST00000620894 481 ntBASIC3.91□□□□□ -1.78
ITGA4P13612 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ITGA4P13612 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.9□□□□□ -1.78
ITGA4P13612 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ITGA4P13612 RNU6-858P-201ENST00000362436 107 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 RNU6-212P-201ENST00000362642 104 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 RNU6-1093P-201ENST00000391194 107 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.9□□□□□ -1.79
ITGA4P13612 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.9□□□□□ -1.79
ITGA4P13612 AC099548.1-201ENST00000421443 426 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 AP000907.1-201ENST00000428428 510 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.9□□□□□ -1.79
ITGA4P13612 HMGN2P16-201ENST00000456802 261 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 RPL26P9-201ENST00000457466 433 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 RNA5SP310-201ENST00000459084 116 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 RPS4XP13-201ENST00000483219 789 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 MRPL42P6-201ENST00000486397 371 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 AC011602.1-201ENST00000546484 331 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.9□□□□□ -1.79
ITGA4P13612 KLKP1-201ENST00000595979 403 ntBASIC3.9□□□□□ -1.79
ITGA4P13612 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ITGA4P13612 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.9□□□□□ -1.79
ITGA4P13612 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ITGA4P13612 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.89□□□□□ -1.79
ITGA4P13612 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.89□□□□□ -1.79
ITGA4P13612 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
ITGA4P13612 SNORA20.1-201ENST00000364790 130 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 SNORD32A-201ENST00000364805 84 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 Y_RNA.439-201ENST00000384119 94 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 RNU6-17P-201ENST00000384245 107 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 RNU6-18P-201ENST00000384527 107 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 MIR490-201ENST00000384865 128 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ITGA4P13612 RNU2-25P-201ENST00000411041 191 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 EIF1AXP1-201ENST00000419267 435 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.89□□□□□ -1.79
ITGA4P13612 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.89□□□□□ -1.79
ITGA4P13612 MTND4LP30-201ENST00000454092 297 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.89□□□□□ -1.79
ITGA4P13612 AC084357.1-201ENST00000473404 255 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AF186996.7-201ENST00000492781 209 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AC006445.2-201ENST00000510061 472 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 Y_RNA.673-201ENST00000516306 88 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AC022868.1-201ENST00000517767 391 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
ITGA4P13612 AC093023.1-201ENST00000547375 507 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.89□□□□□ -1.79
ITGA4P13612 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.89□□□□□ -1.79
ITGA4P13612 AC012433.1-201ENST00000588916 398 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AC019159.1-201ENST00000605094 187 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 AC096577.2-201ENST00000611455 153 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 AC007656.2-201ENST00000624902 4547 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.89□□□□□ -1.79
ITGA4P13612 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.89□□□□□ -1.79
ITGA4P13612 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ITGA4P13612 AL049781.1-201ENST00000623195 3585 ntBASIC3.89□□□□□ -1.79
ITGA4P13612 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ITGA4P13612 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ITGA4P13612 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.88□□□□□ -1.79
ITGA4P13612 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 Y_RNA.84-201ENST00000363011 104 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 RNU6-1280P-201ENST00000365211 107 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 RNVU1-14-201ENST00000384770 164 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 MIR215-201ENST00000384858 110 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 MIR32-201ENST00000384965 70 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 MTHFD2P2-201ENST00000407725 247 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 AC074117.2-201ENST00000417130 397 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.88□□□□□ -1.79
ITGA4P13612 DBIP2-201ENST00000419076 262 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 BX679664.1-201ENST00000434429 253 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 AC007969.2-201ENST00000441891 191 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.88□□□□□ -1.79
ITGA4P13612 SNRPGP7-201ENST00000469016 106 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 RNU6-581P-201ENST00000516214 105 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 CR383656.8-201ENST00000549046 145 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.88□□□□□ -1.79
ITGA4P13612 AC136932.1-201ENST00000574771 208 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 MIR376A1-201ENST00000616574 68 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 U4.6-201ENST00000621618 127 ntBASIC3.88□□□□□ -1.79
ITGA4P13612 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.88□□□□□ -1.79
ITGA4P13612 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ITGA4P13612 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms