Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC109635.4-202ENST00000531666 412 ntBASIC-0.67□□□□□ -2.52
VCANP13611 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.67□□□□□ -2.52
VCANP13611 AC079395.3-201ENST00000615161 484 ntBASIC-0.67□□□□□ -2.52
VCANP13611 AC107982.1-201ENST00000507171 1300 ntBASIC-0.67□□□□□ -2.52
VCANP13611 AC108729.1-201ENST00000487812 947 ntBASIC-0.67□□□□□ -2.52
VCANP13611 AC107027.2-201ENST00000512197 115 ntBASIC-0.67□□□□□ -2.52
VCANP13611 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC-0.67□□□□□ -2.52
VCANP13611 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.67□□□□□ -2.52
VCANP13611 AC024940.5-201ENST00000622889 474 ntBASIC-0.67□□□□□ -2.52
VCANP13611 MIR412-201ENST00000362142 91 ntBASIC-0.68□□□□□ -2.52
VCANP13611 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.68□□□□□ -2.52
VCANP13611 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
VCANP13611 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.68□□□□□ -2.52
VCANP13611 RPL7L1P10-201ENST00000427790 463 ntBASIC-0.68□□□□□ -2.52
VCANP13611 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.68□□□□□ -2.52
VCANP13611 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.68□□□□□ -2.52
VCANP13611 AC010587.2-201ENST00000511727 448 ntBASIC-0.68□□□□□ -2.52
VCANP13611 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC-0.68□□□□□ -2.52
VCANP13611 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC-0.68□□□□□ -2.52
VCANP13611 UCA1.1-201ENST00000620952 75 ntBASIC-0.68□□□□□ -2.52
VCANP13611 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.68□□□□□ -2.52
VCANP13611 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.68□□□□□ -2.52
VCANP13611 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.68□□□□□ -2.52
VCANP13611 RPS15AP10-201ENST00000432472 382 ntBASIC-0.68□□□□□ -2.52
VCANP13611 SEPT7P5-201ENST00000434048 306 ntBASIC-0.68□□□□□ -2.52
VCANP13611 SEPT7P4-201ENST00000437076 306 ntBASIC-0.68□□□□□ -2.52
VCANP13611 AC112693.2-201ENST00000556538 232 ntBASIC-0.68□□□□□ -2.52
VCANP13611 MIR8076-201ENST00000611401 83 ntBASIC-0.68□□□□□ -2.52
VCANP13611 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
VCANP13611 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
VCANP13611 BUD31P2-201ENST00000449374 300 ntBASIC-0.68□□□□□ -2.52
VCANP13611 SNRPGP6-201ENST00000451124 220 ntBASIC-0.68□□□□□ -2.52
VCANP13611 SNORA4.4-201ENST00000515921 135 ntBASIC-0.68□□□□□ -2.52
VCANP13611 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.68□□□□□ -2.52
VCANP13611 ELOCP32-201ENST00000548625 324 ntBASIC-0.68□□□□□ -2.52
VCANP13611 AL357094.1-201ENST00000603845 844 ntBASIC-0.68□□□□□ -2.52
VCANP13611 TRGV6-201ENST00000417928 299 ntBASIC-0.69□□□□□ -2.52
VCANP13611 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.69□□□□□ -2.52
VCANP13611 AL049714.1-201ENST00000466686 347 ntBASIC-0.69□□□□□ -2.52
VCANP13611 HMGB1P38-201ENST00000490557 577 ntBASIC-0.69□□□□□ -2.52
VCANP13611 AC025423.2-201ENST00000537570 439 ntBASIC-0.69□□□□□ -2.52
VCANP13611 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.69□□□□□ -2.52
VCANP13611 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.69□□□□□ -2.52
VCANP13611 AC010615.1-201ENST00000594254 1764 ntBASIC-0.69□□□□□ -2.52
VCANP13611 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.69□□□□□ -2.52
VCANP13611 MTCO1P44-201ENST00000441935 243 ntBASIC-0.69□□□□□ -2.52
VCANP13611 RN7SKP5-201ENST00000517045 272 ntBASIC-0.69□□□□□ -2.52
VCANP13611 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.69□□□□□ -2.52
VCANP13611 SNORD99-201ENST00000408612 74 ntBASIC-0.7□□□□□ -2.52
VCANP13611 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC-0.7□□□□□ -2.52
VCANP13611 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.7□□□□□ -2.52
VCANP13611 AC022022.1-201ENST00000430304 178 ntBASIC-0.7□□□□□ -2.52
VCANP13611 RNU6-1073P-201ENST00000517182 106 ntBASIC-0.7□□□□□ -2.52
VCANP13611 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.7□□□□□ -2.52
VCANP13611 AL355073.2-201ENST00000612106 557 ntBASIC-0.7□□□□□ -2.52
VCANP13611 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
VCANP13611 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.7□□□□□ -2.52
VCANP13611 ZNF886P-201ENST00000450781 723 ntBASIC-0.7□□□□□ -2.52
VCANP13611 AC007151.1-201ENST00000572774 483 ntBASIC-0.7□□□□□ -2.52
VCANP13611 AC078938.1-201ENST00000620993 318 ntBASIC-0.7□□□□□ -2.52
VCANP13611 Z99571.1-201ENST00000636677 394 ntBASIC-0.7□□□□□ -2.52
VCANP13611 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.7□□□□□ -2.52
VCANP13611 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.7□□□□□ -2.52
VCANP13611 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.7□□□□□ -2.52
VCANP13611 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.7□□□□□ -2.52
VCANP13611 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.7□□□□□ -2.52
VCANP13611 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
VCANP13611 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.7□□□□□ -2.52
VCANP13611 HMGN2P26-201ENST00000463169 339 ntBASIC-0.7□□□□□ -2.52
VCANP13611 RNU6-706P-201ENST00000517229 104 ntBASIC-0.7□□□□□ -2.52
VCANP13611 MIR4499-201ENST00000584834 69 ntBASIC-0.7□□□□□ -2.52
VCANP13611 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AL136310.1-201ENST00000404926 654 ntBASIC-0.71□□□□□ -2.52
VCANP13611 RNU2-49P-201ENST00000410666 184 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC006210.1-201ENST00000424882 111 ntBASIC-0.71□□□□□ -2.52
VCANP13611 MTND2P2-201ENST00000434633 945 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.71□□□□□ -2.52
VCANP13611 MIR5697-201ENST00000578045 78 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC005176.2-201ENST00000596933 147 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC010900.2-201ENST00000604508 210 ntBASIC-0.71□□□□□ -2.52
VCANP13611 SNORD1A-201ENST00000364968 72 ntBASIC-0.71□□□□□ -2.52
VCANP13611 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
VCANP13611 AL079342.2-201ENST00000403367 482 ntBASIC-0.71□□□□□ -2.52
VCANP13611 MLLT10P1-201ENST00000418346 262 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC011005.2-201ENST00000487324 359 ntBASIC-0.71□□□□□ -2.52
VCANP13611 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC010186.2-204ENST00000537668 439 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC009033.1-201ENST00000624279 431 ntBASIC-0.71□□□□□ -2.52
VCANP13611 MIR140-201ENST00000385282 100 ntBASIC-0.71□□□□□ -2.52
VCANP13611 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.71□□□□□ -2.52
VCANP13611 RNU6-863P-201ENST00000515989 104 ntBASIC-0.71□□□□□ -2.52
VCANP13611 MIR6828-201ENST00000636181 60 ntBASIC-0.71□□□□□ -2.52
VCANP13611 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
VCANP13611 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.72□□□□□ -2.52
VCANP13611 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.72□□□□□ -2.52
VCANP13611 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.72□□□□□ -2.52
VCANP13611 RNU6-480P-201ENST00000384332 107 ntBASIC-0.72□□□□□ -2.52
VCANP13611 RPL23AP33-201ENST00000442301 452 ntBASIC-0.72□□□□□ -2.52
VCANP13611 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC-0.72□□□□□ -2.52
VCANP13611 RNA5SP470-201ENST00000516463 106 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms