Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RNU6-325P-201ENST00000411132 105 ntBASIC2.76□□□□□ -1.97
PCNAP12004 RNU6-293P-201ENST00000411259 106 ntBASIC2.76□□□□□ -1.97
PCNAP12004 AC074117.2-201ENST00000417130 397 ntBASIC2.76□□□□□ -1.97
PCNAP12004 NUP35P1-201ENST00000422734 947 ntBASIC2.76□□□□□ -1.97
PCNAP12004 RPS3AP52-201ENST00000435639 297 ntBASIC2.76□□□□□ -1.97
PCNAP12004 MTND1P17-201ENST00000448961 204 ntBASIC2.76□□□□□ -1.97
PCNAP12004 RPL31P41-201ENST00000477967 372 ntBASIC2.76□□□□□ -1.97
PCNAP12004 AP001025.1-201ENST00000486139 332 ntBASIC2.76□□□□□ -1.97
PCNAP12004 AC018437.1-201ENST00000492214 406 ntBASIC2.76□□□□□ -1.97
PCNAP12004 RNU5F-8P-201ENST00000515941 111 ntBASIC2.76□□□□□ -1.97
PCNAP12004 AC109479.2-201ENST00000517842 174 ntBASIC2.76□□□□□ -1.97
PCNAP12004 AC022080.3-201ENST00000544433 482 ntBASIC2.76□□□□□ -1.97
PCNAP12004 CR383656.8-201ENST00000549046 145 ntBASIC2.76□□□□□ -1.97
PCNAP12004 AL022345.1-201ENST00000607292 135 ntBASIC2.76□□□□□ -1.97
PCNAP12004 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
PCNAP12004 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCNAP12004 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PCNAP12004 Y_RNA.339-201ENST00000365325 102 ntBASIC2.75□□□□□ -1.97
PCNAP12004 Y_RNA.473-201ENST00000384333 102 ntBASIC2.75□□□□□ -1.97
PCNAP12004 RNU6-692P-201ENST00000384496 107 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AL030996.1-201ENST00000411430 235 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
PCNAP12004 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.75□□□□□ -1.97
PCNAP12004 SNAP23P1-201ENST00000433229 246 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC093019.1-201ENST00000443135 252 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC006026.2-201ENST00000457376 180 ntBASIC2.75□□□□□ -1.97
PCNAP12004 RPS27P27-201ENST00000498779 255 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC083906.5-201ENST00000503722 328 ntBASIC2.75□□□□□ -1.97
PCNAP12004 RN7SKP24-201ENST00000515888 284 ntBASIC2.75□□□□□ -1.97
PCNAP12004 Y_RNA.691-201ENST00000516611 103 ntBASIC2.75□□□□□ -1.97
PCNAP12004 RAB11AP2-201ENST00000545905 639 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC004486.1-201ENST00000546846 233 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.75□□□□□ -1.97
PCNAP12004 RPS3AP23-202ENST00000574601 686 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.75□□□□□ -1.97
PCNAP12004 MIR3670-2-201ENST00000582974 65 ntBASIC2.75□□□□□ -1.97
PCNAP12004 MIR3670-1-201ENST00000584160 65 ntBASIC2.75□□□□□ -1.97
PCNAP12004 MIR3670-3-201ENST00000584855 65 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AL161756.2-201ENST00000604597 246 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AC005046.1-201ENST00000608515 625 ntBASIC2.75□□□□□ -1.97
PCNAP12004 AL132765.2-201ENST00000610812 351 ntBASIC2.75□□□□□ -1.97
PCNAP12004 MIR3670-4-201ENST00000612260 65 ntBASIC2.75□□□□□ -1.97
PCNAP12004 Z82209.1-201ENST00000422141 2135 ntBASIC2.75□□□□□ -1.97
PCNAP12004 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.75□□□□□ -1.97
PCNAP12004 MTND4P23-201ENST00000447723 1363 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.74□□□□□ -1.97
PCNAP12004 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.74□□□□□ -1.97
PCNAP12004 Y_RNA.263-201ENST00000364659 114 ntBASIC2.74□□□□□ -1.97
PCNAP12004 RNU6-843P-201ENST00000384454 104 ntBASIC2.74□□□□□ -1.97
PCNAP12004 RNU6-1304P-201ENST00000411374 106 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AL591043.1-201ENST00000432461 424 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
PCNAP12004 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.74□□□□□ -1.97
PCNAP12004 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.74□□□□□ -1.97
PCNAP12004 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.74□□□□□ -1.97
PCNAP12004 RNU6-277P-201ENST00000516272 106 ntBASIC2.74□□□□□ -1.97
PCNAP12004 SNORA70.24-201ENST00000517233 118 ntBASIC2.74□□□□□ -1.97
PCNAP12004 HPRT1P3-201ENST00000539521 576 ntBASIC2.74□□□□□ -1.97
PCNAP12004 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
PCNAP12004 GLYCAM1-201ENST00000546596 285 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AC093027.1-201ENST00000546698 429 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.74□□□□□ -1.97
PCNAP12004 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.74□□□□□ -1.97
PCNAP12004 AC103810.1-201ENST00000579873 453 ntBASIC2.74□□□□□ -1.97
PCNAP12004 POLR3GP2-201ENST00000588366 668 ntBASIC2.74□□□□□ -1.97
PCNAP12004 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.74□□□□□ -1.97
PCNAP12004 LARP7P1-201ENST00000605576 316 ntBASIC2.74□□□□□ -1.97
PCNAP12004 MIR6128-201ENST00000615528 109 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AL359757.2-201ENST00000624309 274 ntBASIC2.74□□□□□ -1.97
PCNAP12004 AC241585.2-209ENST00000638217 143 ntBASIC2.74□□□□□ -1.97
PCNAP12004 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PCNAP12004 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCNAP12004 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCNAP12004 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PCNAP12004 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.73□□□□□ -1.97
PCNAP12004 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
PCNAP12004 Y_RNA.474-201ENST00000384341 102 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RNU6-851P-201ENST00000384565 107 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RNU6-748P-201ENST00000384648 107 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RPS29P13-201ENST00000402041 169 ntBASIC2.73□□□□□ -1.97
PCNAP12004 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.73□□□□□ -1.97
PCNAP12004 EEF1A1P41-201ENST00000414667 207 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AL139396.1-201ENST00000421137 167 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AL358075.3-201ENST00000426289 226 ntBASIC2.73□□□□□ -1.97
PCNAP12004 Z82205.1-201ENST00000428456 297 ntBASIC2.73□□□□□ -1.97
PCNAP12004 MTND3P9-201ENST00000429526 346 ntBASIC2.73□□□□□ -1.97
PCNAP12004 Z98742.2-201ENST00000431564 187 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RPS15AP10-201ENST00000432472 382 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AL513043.1-201ENST00000439124 535 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.73□□□□□ -1.97
PCNAP12004 AC243964.1-201ENST00000441814 261 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AC007969.2-201ENST00000441891 191 ntBASIC2.73□□□□□ -1.97
PCNAP12004 OSTCP8-201ENST00000445117 448 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AC012308.1-201ENST00000451232 178 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RNU6-1037P-201ENST00000459571 107 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RPL9P9-202ENST00000466501 579 ntBASIC2.73□□□□□ -1.97
PCNAP12004 RPL30P12-201ENST00000474666 353 ntBASIC2.73□□□□□ -1.97
PCNAP12004 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.73□□□□□ -1.97
PCNAP12004 SNORA31.18-201ENST00000517043 134 ntBASIC2.73□□□□□ -1.97
PCNAP12004 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms