Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.58□□□□□ -1.84
SNRPA1P09661 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNRPA1P09661 RNU6-490P-201ENST00000362985 107 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 Y_RNA.252-201ENST00000364556 101 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 RNU6-805P-201ENST00000365643 106 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 RNU6-1032P-201ENST00000384100 107 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 RNU6-1197P-201ENST00000391183 107 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 MRPL42P3-201ENST00000401492 326 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 RNA5SP21-201ENST00000410917 96 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.58□□□□□ -1.84
SNRPA1P09661 AL096701.2-201ENST00000416920 238 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.58□□□□□ -1.84
SNRPA1P09661 AC092573.2-201ENST00000434546 243 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 RPL12P25-201ENST00000455592 494 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.58□□□□□ -1.84
SNRPA1P09661 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.58□□□□□ -1.84
SNRPA1P09661 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.58□□□□□ -1.84
SNRPA1P09661 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.58□□□□□ -1.84
SNRPA1P09661 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.58□□□□□ -1.84
SNRPA1P09661 MIR4680-201ENST00000580906 66 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 MIR3976-201ENST00000606807 139 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 MTND5P16-201ENST00000460269 1703 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SNRPA1P09661 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SNRPA1P09661 AC092593.1-201ENST00000515413 1815 ntBASIC3.58□□□□□ -1.84
SNRPA1P09661 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNRPA1P09661 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SNRPA1P09661 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SNRPA1P09661 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.57□□□□□ -1.84
SNRPA1P09661 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNRPA1P09661 Y_RNA.48-201ENST00000362710 103 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 RNA5SP126-201ENST00000365092 109 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 Y_RNA.364-201ENST00000365532 101 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 RNU6-166P-201ENST00000384371 107 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 MIR512-1-201ENST00000384913 84 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 SNORD56-201ENST00000413522 71 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 YPEL5P1-201ENST00000419731 367 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 BX276092.3-201ENST00000424182 230 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 AC008267.5-201ENST00000424928 265 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 AL627311.1-201ENST00000431514 115 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 AC125238.1-201ENST00000448842 249 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 NDUFB1P2-201ENST00000449477 176 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
SNRPA1P09661 MTND5P22-201ENST00000458380 195 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 AC092798.1-201ENST00000458542 409 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNRPA1P09661 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.57□□□□□ -1.84
SNRPA1P09661 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.57□□□□□ -1.84
SNRPA1P09661 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.57□□□□□ -1.84
SNRPA1P09661 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SNRPA1P09661 Z69720.2-201ENST00000624755 279 ntBASIC3.57□□□□□ -1.84
SNRPA1P09661 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNRPA1P09661 AL359693.1-201ENST00000614959 2407 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 Y_RNA.158-201ENST00000363651 101 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 RNU6-1317P-201ENST00000364582 104 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 RNU6-827P-201ENST00000365553 106 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.56□□□□□ -1.84
SNRPA1P09661 RNU6-140P-201ENST00000384566 108 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 MIR34A-201ENST00000385130 110 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.56□□□□□ -1.84
SNRPA1P09661 TOMM20P4-201ENST00000427861 435 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNRPA1P09661 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.56□□□□□ -1.84
SNRPA1P09661 AL512844.2-201ENST00000433990 593 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 SNRPEP4-201ENST00000435815 279 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 SNRPEP9-201ENST00000436794 238 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 NDUFB4P6-201ENST00000436819 366 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.56□□□□□ -1.84
SNRPA1P09661 RPL23AP45-201ENST00000476406 468 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 AL135752.1-201ENST00000479477 471 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 AC006445.2-201ENST00000510061 472 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 SNORA25.10-201ENST00000515926 124 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 RNU6-307P-201ENST00000516743 106 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 CASP1P1-201ENST00000526345 212 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.56□□□□□ -1.84
SNRPA1P09661 AC010653.1-201ENST00000571108 881 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 AC005899.2-201ENST00000584353 90 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 AC005014.2-201ENST00000607795 599 ntBASIC3.56□□□□□ -1.84
SNRPA1P09661 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SNRPA1P09661 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNRPA1P09661 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNRPA1P09661 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.55□□□□□ -1.84
SNRPA1P09661 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.55□□□□□ -1.84
SNRPA1P09661 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.55□□□□□ -1.84
SNRPA1P09661 RNU6-859P-201ENST00000362728 107 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RNU6-1309P-201ENST00000363305 108 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 Y_RNA.144-201ENST00000363521 113 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC117470.1-201ENST00000381974 330 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RNU6-301P-201ENST00000384277 107 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RNU6-933P-201ENST00000384424 107 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 Y_RNA.527-201ENST00000384573 102 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 MIR196B-201ENST00000384852 84 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.55□□□□□ -1.84
SNRPA1P09661 RNA5SP293-201ENST00000410527 113 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 MRPS18CP6-201ENST00000423587 223 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AL353997.1-201ENST00000432936 108 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.55□□□□□ -1.84
SNRPA1P09661 DAP3P1-201ENST00000441522 278 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 1056.5 ms