Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
MMP3P08254 AL139396.1-201ENST00000421137 167 ntBASIC2.92□□□□□ -1.94
MMP3P08254 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP3P08254 AC009969.1-201ENST00000438726 172 ntBASIC2.92□□□□□ -1.94
MMP3P08254 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.92□□□□□ -1.94
MMP3P08254 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP3P08254 MTATP6P7-201ENST00000453315 681 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU7-187P-201ENST00000458985 68 ntBASIC2.92□□□□□ -1.94
MMP3P08254 Y_RNA.632-201ENST00000459189 102 ntBASIC2.92□□□□□ -1.94
MMP3P08254 SRIP1-201ENST00000489235 288 ntBASIC2.92□□□□□ -1.94
MMP3P08254 MTCO1P29-201ENST00000496868 288 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU6-559P-201ENST00000516151 98 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU1-41P-201ENST00000516161 162 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU6-581P-201ENST00000516214 105 ntBASIC2.92□□□□□ -1.94
MMP3P08254 RNU1-48P-201ENST00000516400 162 ntBASIC2.92□□□□□ -1.94
MMP3P08254 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.92□□□□□ -1.94
MMP3P08254 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
MMP3P08254 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.92□□□□□ -1.94
MMP3P08254 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.92□□□□□ -1.94
MMP3P08254 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP3P08254 FRG2DP-202ENST00000566967 323 ntBASIC2.92□□□□□ -1.94
MMP3P08254 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
MMP3P08254 AL161629.2-201ENST00000615347 275 ntBASIC2.92□□□□□ -1.94
MMP3P08254 MIR6128-201ENST00000615528 109 ntBASIC2.92□□□□□ -1.94
MMP3P08254 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP3P08254 Z69720.2-201ENST00000624755 279 ntBASIC2.92□□□□□ -1.94
MMP3P08254 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
MMP3P08254 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MMP3P08254 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.92□□□□□ -1.94
MMP3P08254 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MMP3P08254 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.91□□□□□ -1.94
MMP3P08254 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
MMP3P08254 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MMP3P08254 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.91□□□□□ -1.94
MMP3P08254 MIR518D-201ENST00000385014 87 ntBASIC2.91□□□□□ -1.94
MMP3P08254 RPL37P10-201ENST00000412884 288 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC074085.1-201ENST00000413598 418 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.91□□□□□ -1.94
MMP3P08254 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.91□□□□□ -1.94
MMP3P08254 AC010095.1-201ENST00000443543 144 ntBASIC2.91□□□□□ -1.94
MMP3P08254 BTF3P15-201ENST00000455606 336 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC096745.1-201ENST00000509945 370 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.91□□□□□ -1.94
MMP3P08254 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
MMP3P08254 RNA5SP24-201ENST00000516478 95 ntBASIC2.91□□□□□ -1.94
MMP3P08254 RNU6-1213P-201ENST00000517075 94 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.91□□□□□ -1.94
MMP3P08254 GLYCAM1-201ENST00000546596 285 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC103996.1-201ENST00000555468 102 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.91□□□□□ -1.94
MMP3P08254 AC007151.1-201ENST00000572774 483 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.91□□□□□ -1.94
MMP3P08254 AC113139.1-201ENST00000605049 239 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AL627309.6-201ENST00000606857 840 ntBASIC2.91□□□□□ -1.94
MMP3P08254 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.91□□□□□ -1.94
MMP3P08254 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.91□□□□□ -1.94
MMP3P08254 AC090617.7-201ENST00000623952 126 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC064859.1-201ENST00000624741 174 ntBASIC2.91□□□□□ -1.94
MMP3P08254 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.91□□□□□ -1.94
MMP3P08254 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
MMP3P08254 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
MMP3P08254 RNU6-428P-201ENST00000362942 107 ntBASIC2.9□□□□□ -1.95
MMP3P08254 Y_RNA.151-201ENST00000363566 112 ntBASIC2.9□□□□□ -1.95
MMP3P08254 RNU6-128P-201ENST00000383976 107 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
MMP3P08254 RN7SKP158-201ENST00000410453 326 ntBASIC2.9□□□□□ -1.95
MMP3P08254 RNU2-49P-201ENST00000410666 184 ntBASIC2.9□□□□□ -1.95
MMP3P08254 RNU6-370P-201ENST00000411008 104 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.9□□□□□ -1.95
MMP3P08254 NCOR1P3-201ENST00000420479 303 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.9□□□□□ -1.95
MMP3P08254 BPY2DP-201ENST00000422208 265 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.9□□□□□ -1.95
MMP3P08254 AC104332.2-201ENST00000429959 156 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AL714022.1-201ENST00000439897 151 ntBASIC2.9□□□□□ -1.95
MMP3P08254 UBE2V1P7-201ENST00000446395 340 ntBASIC2.9□□□□□ -1.95
MMP3P08254 Y_RNA.635-201ENST00000459041 101 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AC018437.1-201ENST00000492214 406 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AC026801.1-201ENST00000497178 464 ntBASIC2.9□□□□□ -1.95
MMP3P08254 SNORA31.1-201ENST00000515993 133 ntBASIC2.9□□□□□ -1.95
MMP3P08254 SNORA31.5-201ENST00000516190 133 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.9□□□□□ -1.95
MMP3P08254 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.9□□□□□ -1.95
MMP3P08254 LINC00933-203ENST00000559812 219 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AL133255.1-201ENST00000606374 441 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AC010378.1-201ENST00000619270 362 ntBASIC2.9□□□□□ -1.95
MMP3P08254 AC097372.5-201ENST00000623665 376 ntBASIC2.9□□□□□ -1.95
MMP3P08254 CTSLP2-204ENST00000629029 392 ntBASIC2.9□□□□□ -1.95
MMP3P08254 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
MMP3P08254 ADAM3A-203ENST00000461344 2157 ntBASIC2.9□□□□□ -1.95
MMP3P08254 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
MMP3P08254 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MMP3P08254 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.89□□□□□ -1.95
MMP3P08254 RNU6-78P-201ENST00000362897 107 ntBASIC2.89□□□□□ -1.95
MMP3P08254 Y_RNA.813-201ENST00000364639 102 ntBASIC2.89□□□□□ -1.95
MMP3P08254 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
MMP3P08254 Y_RNA.384-201ENST00000383909 102 ntBASIC2.89□□□□□ -1.95
MMP3P08254 Y_RNA.394-201ENST00000383942 103 ntBASIC2.89□□□□□ -1.95
MMP3P08254 NDUFS5P4-201ENST00000412983 318 ntBASIC2.89□□□□□ -1.95
MMP3P08254 AL096701.2-201ENST00000416920 238 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms