Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU6-1203P-201ENST00000410703 110 ntBASIC4.52□□□□□ -1.69
NEFMP07197 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.52□□□□□ -1.69
NEFMP07197 BX679664.1-201ENST00000434429 253 ntBASIC4.52□□□□□ -1.69
NEFMP07197 NDUFB1P2-201ENST00000449477 176 ntBASIC4.52□□□□□ -1.69
NEFMP07197 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.52□□□□□ -1.69
NEFMP07197 RNA5SP471-201ENST00000516971 106 ntBASIC4.52□□□□□ -1.69
NEFMP07197 SNORA81.3-201ENST00000517283 198 ntBASIC4.52□□□□□ -1.69
NEFMP07197 AP004371.1-201ENST00000525240 214 ntBASIC4.52□□□□□ -1.69
NEFMP07197 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.52□□□□□ -1.69
NEFMP07197 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.52□□□□□ -1.69
NEFMP07197 AC002545.1-201ENST00000592511 181 ntBASIC4.52□□□□□ -1.69
NEFMP07197 AC098826.3-201ENST00000603823 466 ntBASIC4.52□□□□□ -1.69
NEFMP07197 U2.22-201ENST00000636441 106 ntBASIC4.52□□□□□ -1.69
NEFMP07197 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEFMP07197 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEFMP07197 Z75746.1-201ENST00000440243 2080 ntBASIC4.52□□□□□ -1.69
NEFMP07197 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.51□□□□□ -1.69
NEFMP07197 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NEFMP07197 MIR30E-201ENST00000362104 92 ntBASIC4.51□□□□□ -1.69
NEFMP07197 MIR412-201ENST00000362142 91 ntBASIC4.51□□□□□ -1.69
NEFMP07197 Y_RNA.27-201ENST00000362540 103 ntBASIC4.51□□□□□ -1.69
NEFMP07197 RNU6-1167P-201ENST00000363227 94 ntBASIC4.51□□□□□ -1.69
NEFMP07197 SNORD27-201ENST00000363981 72 ntBASIC4.51□□□□□ -1.69
NEFMP07197 RNA5SP387-201ENST00000364226 106 ntBASIC4.51□□□□□ -1.69
NEFMP07197 RNU6-512P-201ENST00000364438 103 ntBASIC4.51□□□□□ -1.69
NEFMP07197 MTCYBP2-201ENST00000407745 171 ntBASIC4.51□□□□□ -1.69
NEFMP07197 RNA5SP44-201ENST00000410446 133 ntBASIC4.51□□□□□ -1.69
NEFMP07197 RPL21P38-201ENST00000418090 167 ntBASIC4.51□□□□□ -1.69
NEFMP07197 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.51□□□□□ -1.69
NEFMP07197 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.51□□□□□ -1.69
NEFMP07197 MED28P2-201ENST00000475771 317 ntBASIC4.51□□□□□ -1.69
NEFMP07197 RNU5B-3P-201ENST00000516601 115 ntBASIC4.51□□□□□ -1.69
NEFMP07197 Y_RNA.713-201ENST00000517013 96 ntBASIC4.51□□□□□ -1.69
NEFMP07197 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.51□□□□□ -1.69
NEFMP07197 AP006245.1-201ENST00000522549 120 ntBASIC4.51□□□□□ -1.69
NEFMP07197 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.51□□□□□ -1.69
NEFMP07197 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEFMP07197 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.51□□□□□ -1.69
NEFMP07197 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NEFMP07197 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEFMP07197 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEFMP07197 Y_RNA.29-201ENST00000362570 113 ntBASIC4.5□□□□□ -1.69
NEFMP07197 Y_RNA.84-201ENST00000363011 104 ntBASIC4.5□□□□□ -1.69
NEFMP07197 Y_RNA.105-201ENST00000363182 111 ntBASIC4.5□□□□□ -1.69
NEFMP07197 Y_RNA.180-201ENST00000363867 113 ntBASIC4.5□□□□□ -1.69
NEFMP07197 RNU6-121P-201ENST00000410525 99 ntBASIC4.5□□□□□ -1.69
NEFMP07197 RNU6-1025P-201ENST00000410629 104 ntBASIC4.5□□□□□ -1.69
NEFMP07197 SNORD56-201ENST00000413522 71 ntBASIC4.5□□□□□ -1.69
NEFMP07197 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.5□□□□□ -1.69
NEFMP07197 AL158156.1-201ENST00000422509 473 ntBASIC4.5□□□□□ -1.69
NEFMP07197 RPL21P66-201ENST00000426566 466 ntBASIC4.5□□□□□ -1.69
NEFMP07197 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.5□□□□□ -1.69
NEFMP07197 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.5□□□□□ -1.69
NEFMP07197 SSXP4-201ENST00000451349 245 ntBASIC4.5□□□□□ -1.69
NEFMP07197 PRELID3BP1-201ENST00000457142 540 ntBASIC4.5□□□□□ -1.69
NEFMP07197 RN7SL601P-201ENST00000471221 293 ntBASIC4.5□□□□□ -1.69
NEFMP07197 RPL7P5-201ENST00000471472 736 ntBASIC4.5□□□□□ -1.69
NEFMP07197 AC093663.1-201ENST00000497190 394 ntBASIC4.5□□□□□ -1.69
NEFMP07197 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.5□□□□□ -1.69
NEFMP07197 AC067942.3-201ENST00000512025 362 ntBASIC4.5□□□□□ -1.69
NEFMP07197 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.5□□□□□ -1.69
NEFMP07197 AC107934.2-201ENST00000518653 310 ntBASIC4.5□□□□□ -1.69
NEFMP07197 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.5□□□□□ -1.69
NEFMP07197 AC084851.1-201ENST00000529105 249 ntBASIC4.5□□□□□ -1.69
NEFMP07197 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.5□□□□□ -1.69
NEFMP07197 MIR4276-201ENST00000584832 70 ntBASIC4.5□□□□□ -1.69
NEFMP07197 AP001282.2-201ENST00000616149 309 ntBASIC4.5□□□□□ -1.69
NEFMP07197 FTX_2.1-201ENST00000618816 94 ntBASIC4.5□□□□□ -1.69
NEFMP07197 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.5□□□□□ -1.69
NEFMP07197 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NEFMP07197 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NEFMP07197 AP000560.1-201ENST00000624150 1937 ntBASIC4.5□□□□□ -1.69
NEFMP07197 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NEFMP07197 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NEFMP07197 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-37P-201ENST00000362692 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-173P-201ENST00000364215 104 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-11P-201ENST00000364234 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-7-201ENST00000364784 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-8-201ENST00000365467 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-25P-201ENST00000383873 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-1-201ENST00000383898 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-48P-201ENST00000384161 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-36P-201ENST00000384172 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-4P-201ENST00000384205 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-5P-201ENST00000384238 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-3P-201ENST00000384314 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-16P-201ENST00000384385 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-15P-201ENST00000384534 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-2-201ENST00000384627 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-29P-201ENST00000384637 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-9-201ENST00000384776 107 ntBASIC4.49□□□□□ -1.69
NEFMP07197 RNU6-130P-201ENST00000411112 103 ntBASIC4.49□□□□□ -1.69
NEFMP07197 SDAD1P3-201ENST00000427380 333 ntBASIC4.49□□□□□ -1.69
NEFMP07197 TOMM20P4-201ENST00000427861 435 ntBASIC4.49□□□□□ -1.69
NEFMP07197 AP000907.1-201ENST00000428428 510 ntBASIC4.49□□□□□ -1.69
NEFMP07197 MYL8P-204ENST00000431574 518 ntBASIC4.49□□□□□ -1.69
NEFMP07197 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.49□□□□□ -1.69
NEFMP07197 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.49□□□□□ -1.69
NEFMP07197 AL161798.1-201ENST00000604630 131 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms