Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RAP1BP3-201ENST00000407180 549 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 SNORA11.2-201ENST00000408318 127 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 MIR1261-201ENST00000408659 82 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 RNA5SP390-201ENST00000410191 113 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 OR9R1P-201ENST00000412200 877 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 PIGFP2-201ENST00000421400 651 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 MTND4P32-201ENST00000437189 1237 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC007969.2-201ENST00000441891 191 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 GPM6BP3-201ENST00000442797 145 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 C1DP4-201ENST00000455429 424 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 snoU13.14-201ENST00000459372 104 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC006512.1-201ENST00000468816 291 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC104136.1-201ENST00000512969 394 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 RNU6-430P-201ENST00000517078 107 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 RNU2-19P-201ENST00000517288 84 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AP003392.2-201ENST00000527269 208 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 CYCSP27-201ENST00000527643 293 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AL031274.2-201ENST00000599419 203 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AL590229.1-201ENST00000603497 542 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC025449.1-201ENST00000603896 529 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC123912.5-201ENST00000605470 343 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 Z69720.2-201ENST00000624755 279 ntBASIC1.58□□□□□ -2.16
HLA-DPB1P04440 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DPB1P04440 ZNF355P-201ENST00000427301 3216 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 snoU2_19.1-201ENST00000362361 80 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-37P-201ENST00000362692 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-11P-201ENST00000364234 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 Y_RNA.324-201ENST00000365165 102 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-25P-201ENST00000383873 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-1-201ENST00000383898 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-48P-201ENST00000384161 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-36P-201ENST00000384172 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-4P-201ENST00000384205 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-5P-201ENST00000384238 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-3P-201ENST00000384314 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-16P-201ENST00000384385 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-15P-201ENST00000384534 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-2-201ENST00000384627 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-29P-201ENST00000384637 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-9-201ENST00000384776 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-33P-201ENST00000384793 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 HMGN2P39-201ENST00000398005 273 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 TOMM20P4-201ENST00000427861 435 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 MTCO2P11-201ENST00000431069 680 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 MTND1P18-201ENST00000448191 573 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC132479.1-201ENST00000449160 144 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 MTND1P27-201ENST00000451117 902 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC107032.1-201ENST00000485945 480 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC098862.1-201ENST00000504991 413 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 Y_RNA.695-201ENST00000516715 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNA5SP137-201ENST00000516833 135 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-667P-201ENST00000517186 102 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AP002963.1-201ENST00000530590 184 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 SUB1P2-201ENST00000556401 297 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 MIR4528-201ENST00000577763 90 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC025165.5-201ENST00000602802 578 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AC008945.2-201ENST00000606056 604 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 RNU6-6P-201ENST00000606623 107 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AL158063.1-201ENST00000615349 536 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 AL159153.1-201ENST00000619688 317 ntBASIC1.57□□□□□ -2.16
HLA-DPB1P04440 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DPB1P04440 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 Y_RNA.159-201ENST00000363674 87 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DPB1P04440 SNORA75-201ENST00000384158 137 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 SNORA16.2-201ENST00000390991 127 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 SNORA46.1-201ENST00000391069 153 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC068050.1-201ENST00000394891 380 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 CBX3P9-201ENST00000402326 552 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 BTF3L4P1-201ENST00000413813 468 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 HMGN2P3-201ENST00000433603 273 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 HMGN2P5-201ENST00000436882 273 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AL122001.1-201ENST00000457027 370 ntBASIC1.56□□□□□ -2.16
HLA-DPB1P04440 AC006026.2-201ENST00000457376 180 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms