Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU6-667P-201ENST00000517186 102 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 RNU2-19P-201ENST00000517288 84 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC034114.1-201ENST00000520293 285 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 CYCSP27-201ENST00000527643 293 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 NDUFA5P6-201ENST00000542110 379 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC110760.3-201ENST00000598794 467 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AL031274.2-201ENST00000599419 203 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC025165.5-201ENST00000602802 578 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC091834.1-201ENST00000614543 472 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC063943.3-201ENST00000615562 356 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 SDR42E1P4-201ENST00000620894 481 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC007792.1-201ENST00000623023 402 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AL354685.2-201ENST00000448218 1447 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 XGY1-201ENST00000381172 446 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.553-201ENST00000384670 102 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RNU6-903P-201ENST00000391270 109 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 HMGN2P39-201ENST00000398005 273 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RNU2-32P-201ENST00000411193 191 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AL135786.1-201ENST00000415892 214 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 MTATP6P18-201ENST00000417994 673 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 PRPS1P1-201ENST00000445305 876 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AL353705.4-201ENST00000449661 238 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC107032.1-201ENST00000485945 480 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RPL30P1-201ENST00000488676 339 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 LRRC34P2-201ENST00000514850 553 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RNU6-377P-201ENST00000515965 102 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RNU6-965P-201ENST00000516721 96 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RN7SKP219-201ENST00000516825 296 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 RNA5SP137-201ENST00000516833 135 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC006362.1-201ENST00000567392 174 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AGGF1P4-201ENST00000568249 801 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 MTATP6P3-201ENST00000581686 676 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC068790.2-201ENST00000602601 557 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC002044.1-201ENST00000606707 158 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC008536.2-201ENST00000607284 349 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC109347.2-201ENST00000610220 349 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC004908.3-201ENST00000610248 625 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC104073.3-201ENST00000610942 955 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 uc_338.11-201ENST00000619132 160 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC022418.1-201ENST00000624118 445 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 AC091932.3-201ENST00000624223 323 ntBASIC1.46□□□□□ -2.18
HLA-DQA1P01909 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQA1P01909 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC002543.1-201ENST00000299783 1954 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 RNU6-428P-201ENST00000362942 107 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 RNU6-1120P-201ENST00000362988 108 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 RNU6-105P-201ENST00000363909 104 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.359-201ENST00000365498 102 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.381-201ENST00000365666 102 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 RNU6-434P-201ENST00000384376 107 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 MIR676-201ENST00000390702 67 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 SNORD56-201ENST00000413522 71 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 MTCYBP8-201ENST00000422855 651 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC096920.1-201ENST00000423991 241 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 MTCO2P16-201ENST00000436962 677 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC243964.1-201ENST00000441814 261 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 ANXA2P1-201ENST00000505539 926 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC010424.1-201ENST00000506336 297 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC105417.1-201ENST00000514691 285 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 SNORA25.17-201ENST00000517184 124 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AL356057.1-201ENST00000533798 831 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AP000873.5-201ENST00000533906 236 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AP000763.2-201ENST00000540641 163 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC023050.3-201ENST00000541142 333 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC009063.1-201ENST00000563342 702 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 MIR5583-1-201ENST00000580941 59 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AL391646.1-201ENST00000603860 190 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AL136363.2-201ENST00000604173 851 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AL627230.6-201ENST00000611129 280 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AL132822.1-201ENST00000617063 513 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.45□□□□□ -2.18
HLA-DQA1P01909 AC097520.1-201ENST00000624435 385 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms