Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL627311.1-201ENST00000431514 115 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PDGFBP01127 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
PDGFBP01127 SNRPFP3-201ENST00000457792 225 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 SCARNA18-201ENST00000459004 134 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFBP01127 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.29□□□□□ -2.04
PDGFBP01127 AC009646.1-201ENST00000510455 318 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 RNA5SP401-201ENST00000515920 127 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 RNU1-86P-201ENST00000516108 154 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 RNU1-107P-201ENST00000516617 154 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AC118273.2-201ENST00000532092 465 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AL355297.2-201ENST00000604792 129 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AL161423.1-201ENST00000613700 262 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.29□□□□□ -2.04
PDGFBP01127 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PDGFBP01127 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PDGFBP01127 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.29□□□□□ -2.04
PDGFBP01127 HAUS6P2-201ENST00000433254 2404 ntBASIC2.29□□□□□ -2.04
PDGFBP01127 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
PDGFBP01127 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
PDGFBP01127 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PDGFBP01127 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDGFBP01127 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PDGFBP01127 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PDGFBP01127 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.28□□□□□ -2.04
PDGFBP01127 RNU6-1085P-201ENST00000363576 107 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 SNORD116-4-201ENST00000384733 96 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 RNU6-903P-201ENST00000391270 109 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 UBE2V1P10-201ENST00000414685 269 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC006026.2-201ENST00000457376 180 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC073901.1-201ENST00000462471 408 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 MED28P2-201ENST00000475771 317 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.28□□□□□ -2.04
PDGFBP01127 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.28□□□□□ -2.04
PDGFBP01127 AP004607.1-201ENST00000524456 203 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AP003072.2-201ENST00000527756 676 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC016957.1-201ENST00000534895 309 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AK6P1-201ENST00000540219 478 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 GNAI2P1-201ENST00000541815 315 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.28□□□□□ -2.04
PDGFBP01127 AL512360.1-201ENST00000555346 234 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AL356575.1-201ENST00000603008 283 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC004492.1-201ENST00000607036 742 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC009233.1-201ENST00000616477 371 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC010378.1-201ENST00000619270 362 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC099654.12-201ENST00000639868 649 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 AC080100.1-201ENST00000624239 5356 ntBASIC2.28□□□□□ -2.04
PDGFBP01127 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDGFBP01127 RNU6-552P-201ENST00000362869 119 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 SNORD114-19-201ENST00000363072 75 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 SNORA25.6-201ENST00000364121 118 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 RNU6-1103P-201ENST00000384150 107 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 RNU1-148P-201ENST00000384472 162 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 CIR1P3-201ENST00000405137 479 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AL162578.1-201ENST00000406202 378 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AL590002.1-201ENST00000406554 418 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 FTH1P15-201ENST00000406984 280 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFBP01127 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFBP01127 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 MTND1P1-201ENST00000445453 368 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.27□□□□□ -2.05
PDGFBP01127 RNU6-506P-201ENST00000516553 94 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 Y_RNA.687-201ENST00000516558 91 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFBP01127 CBX3P7-201ENST00000532876 502 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 HIF1AP1-201ENST00000553642 175 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.27□□□□□ -2.05
PDGFBP01127 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.27□□□□□ -2.05
PDGFBP01127 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.27□□□□□ -2.05
PDGFBP01127 snoU13.31-201ENST00000607291 104 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 AC092954.2-201ENST00000609103 430 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.27□□□□□ -2.05
PDGFBP01127 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PDGFBP01127 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PDGFBP01127 AL354685.2-201ENST00000448218 1447 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFBP01127 RNU6-384P-201ENST00000364900 104 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 RNU6-487P-201ENST00000365430 104 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 RNU6-1215P-201ENST00000384441 102 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 RNU6-393P-201ENST00000384475 107 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 SNORA41-201ENST00000384675 132 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AL606923.1-201ENST00000406616 190 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 RNU4-46P-201ENST00000410818 138 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.26□□□□□ -2.05
PDGFBP01127 MTCYBP5-201ENST00000423752 1135 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AL121601.2-201ENST00000438019 707 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 IPO7P1-201ENST00000442031 636 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 PRPS1P1-201ENST00000445305 876 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC073415.1-201ENST00000449240 153 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms