Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLPXO76031 MTND5P17-201ENST00000418405 1603 ntBASIC1.63□□□□□ -2.15
CLPXO76031 SNORD56.1-201ENST00000362913 68 ntBASIC1.63□□□□□ -2.15
CLPXO76031 SNORD115-3-201ENST00000363100 82 ntBASIC1.63□□□□□ -2.15
CLPXO76031 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CLPXO76031 Y_RNA.560-201ENST00000384689 102 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AL031577.2-201ENST00000404133 280 ntBASIC1.63□□□□□ -2.15
CLPXO76031 RPS3AP3-201ENST00000411933 242 ntBASIC1.63□□□□□ -2.15
CLPXO76031 BTF3L4P1-201ENST00000413813 468 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.63□□□□□ -2.15
CLPXO76031 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.63□□□□□ -2.15
CLPXO76031 MTATP6P16-201ENST00000434543 526 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.63□□□□□ -2.15
CLPXO76031 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
CLPXO76031 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.63□□□□□ -2.15
CLPXO76031 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.63□□□□□ -2.15
CLPXO76031 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.63□□□□□ -2.15
CLPXO76031 PRELID3BP1-201ENST00000457142 540 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.63□□□□□ -2.15
CLPXO76031 AC117532.1-201ENST00000514638 323 ntBASIC1.63□□□□□ -2.15
CLPXO76031 RNU6-410P-201ENST00000517006 107 ntBASIC1.63□□□□□ -2.15
CLPXO76031 RNU2-46P-201ENST00000517038 113 ntBASIC1.63□□□□□ -2.15
CLPXO76031 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.63□□□□□ -2.15
CLPXO76031 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.63□□□□□ -2.15
CLPXO76031 AC018630.3-201ENST00000542637 96 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC007375.1-201ENST00000554513 578 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.63□□□□□ -2.15
CLPXO76031 AC008015.1-201ENST00000555505 465 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.63□□□□□ -2.15
CLPXO76031 AC011494.1-201ENST00000596454 237 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC073539.2-201ENST00000597113 165 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC078795.2-201ENST00000602835 1252 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
CLPXO76031 AC004908.3-201ENST00000610248 625 ntBASIC1.63□□□□□ -2.15
CLPXO76031 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLPXO76031 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.62□□□□□ -2.15
CLPXO76031 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.62□□□□□ -2.15
CLPXO76031 RNU6-78P-201ENST00000362897 107 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RNU6-553P-201ENST00000364047 96 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RNU5E-7P-201ENST00000365290 117 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RNU6-169P-201ENST00000365336 107 ntBASIC1.62□□□□□ -2.15
CLPXO76031 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
CLPXO76031 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CLPXO76031 RNU2-2P-201ENST00000410396 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC009310.1-201ENST00000414414 451 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.62□□□□□ -2.15
CLPXO76031 AC079781.2-201ENST00000446424 169 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC112492.4-201ENST00000456549 352 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RNU7-125P-201ENST00000458760 62 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RPL30P12-201ENST00000474666 353 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RN7SKP287-201ENST00000516546 266 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.62□□□□□ -2.15
CLPXO76031 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.62□□□□□ -2.15
CLPXO76031 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.62□□□□□ -2.15
CLPXO76031 AC022880.1-201ENST00000534017 973 ntBASIC1.62□□□□□ -2.15
CLPXO76031 ZNF321P-202ENST00000550843 495 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC087883.1-201ENST00000551882 391 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.62□□□□□ -2.15
CLPXO76031 MIR548AB-201ENST00000584917 84 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AL136363.2-201ENST00000604173 851 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC093424.1-201ENST00000604999 338 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.15-201ENST00000611544 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.16-201ENST00000613119 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.12-201ENST00000613778 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.20-201ENST00000613956 192 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.9-201ENST00000615427 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.11-201ENST00000616345 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.2-201ENST00000616535 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.3-201ENST00000617785 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.19-201ENST00000618602 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 RNU2-1-201ENST00000618664 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.6-201ENST00000619225 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.5-201ENST00000619465 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AL159153.1-201ENST00000619688 317 ntBASIC1.62□□□□□ -2.15
CLPXO76031 U2.10-201ENST00000620268 191 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AF246928.1-201ENST00000623768 87 ntBASIC1.62□□□□□ -2.15
CLPXO76031 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
CLPXO76031 U6.114-201ENST00000636407 96 ntBASIC1.62□□□□□ -2.15
CLPXO76031 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.62□□□□□ -2.15
CLPXO76031 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.62□□□□□ -2.15
CLPXO76031 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.61□□□□□ -2.15
CLPXO76031 U8.3-201ENST00000363321 132 ntBASIC1.61□□□□□ -2.15
CLPXO76031 SNORD14D-201ENST00000384390 87 ntBASIC1.61□□□□□ -2.15
CLPXO76031 Y_RNA.576-201ENST00000384781 102 ntBASIC1.61□□□□□ -2.15
CLPXO76031 SRIP3-201ENST00000413200 219 ntBASIC1.61□□□□□ -2.15
CLPXO76031 OR6C66P-201ENST00000414917 930 ntBASIC1.61□□□□□ -2.15
CLPXO76031 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
CLPXO76031 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.61□□□□□ -2.15
CLPXO76031 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.61□□□□□ -2.15
CLPXO76031 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.61□□□□□ -2.15
CLPXO76031 MTND2P33-201ENST00000506452 1031 ntBASIC1.61□□□□□ -2.15
CLPXO76031 AC104806.1-201ENST00000508720 308 ntBASIC1.61□□□□□ -2.15
CLPXO76031 MTND3P25-201ENST00000509243 135 ntBASIC1.61□□□□□ -2.15
CLPXO76031 MTCYBP40-201ENST00000509390 1135 ntBASIC1.61□□□□□ -2.15
CLPXO76031 Y_RNA.676-201ENST00000516393 96 ntBASIC1.61□□□□□ -2.15
CLPXO76031 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.61□□□□□ -2.15
CLPXO76031 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.61□□□□□ -2.15
CLPXO76031 AC090572.1-201ENST00000519251 160 ntBASIC1.61□□□□□ -2.15
CLPXO76031 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
CLPXO76031 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms