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Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
AC087683.1-201
ENST00000591187
441 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC025165.5-201
ENST00000602802
578 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
NDUFA8P1-201
ENST00000605525
367 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC008536.2-201
ENST00000607284
349 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC093788.1-201
ENST00000609356
927 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC026585.1-201
ENST00000619582
524 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC048344.4-201
ENST00000619744
527 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AL031601.2-202
ENST00000622650
282 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC011124.2-201
ENST00000518739
3222 nt
TSL 1 (best)
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
SNORA6-201
ENST00000384033
151 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-1042P-201
ENST00000384204
107 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-517P-201
ENST00000384362
110 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-434P-201
ENST00000384376
107 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-393P-201
ENST00000384475
107 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
SNORD116-20-201
ENST00000384529
92 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-482P-201
ENST00000391068
107 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-903P-201
ENST00000391270
109 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNA5SP390-201
ENST00000410191
113 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AL663109.1-201
ENST00000411498
844 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
OR9R1P-201
ENST00000412200
877 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC074117.2-201
ENST00000417130
397 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AIMP1P2-201
ENST00000425294
312 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AL451060.1-203
ENST00000431307
362 nt
TSL 3
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC002486.1-201
ENST00000435098
391 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AP000431.2-201
ENST00000450653
790 nt
TSL 2
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
MTCYBP40-201
ENST00000509390
1135 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNA5SP200-201
ENST00000516360
103 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
RNU6-548P-201
ENST00000517083
115 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC021698.1-201
ENST00000524858
716 nt
TSL 3
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC024909.2-201
ENST00000553035
286 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC009269.3-201
ENST00000558429
472 nt
TSL 5
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC017083.3-201
ENST00000609955
700 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC008121.3-201
ENST00000618726
433 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC009831.4-201
ENST00000620744
325 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
AC022418.1-201
ENST00000624118
445 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
Z69720.2-201
ENST00000624755
279 nt
BASIC
2.09
□□□□□ -2.07
SDC3
O75056
CDK1-209
ENST00000614696
1884 nt
TSL 5
BASIC
2.09
□□□□□ -2.08
SDC3
O75056
OGN-201
ENST00000262551
2971 nt
APPRIS P1
TSL 5
BASIC
2.09
□□□□□ -2.08
SDC3
O75056
KLRA1P-202
ENST00000510134
1410 nt
TSL 5
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
FAR1-204
ENST00000532502
5820 nt
TSL 2
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
LINC01684-201
ENST00000415182
2176 nt
TSL 1 (best)
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
CEP57L1-201
ENST00000359793
2515 nt
APPRIS P3
TSL 1 (best)
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
Y_RNA.1-201
ENST00000352915
104 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
RNU6-552P-201
ENST00000362869
119 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
Y_RNA.324-201
ENST00000365165
102 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
Y_RNA.399-201
ENST00000383955
105 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AL513008.1-201
ENST00000412701
161 nt
TSL 5
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
UBE2V1P10-201
ENST00000414685
269 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AC093423.2-201
ENST00000429074
437 nt
TSL 3
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
HMGN2P23-201
ENST00000456759
269 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
RPL23AP42-201
ENST00000471152
471 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AC079140.5-201
ENST00000507882
310 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AL358937.1-201
ENST00000524512
336 nt
TSL 2
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AP000889.2-201
ENST00000532684
490 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AC091047.1-201
ENST00000533344
552 nt
TSL 4
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AP003034.1-201
ENST00000534621
422 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
MTATP6P3-201
ENST00000581686
676 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
RPL30P11-203
ENST00000598995
310 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AC073410.2-201
ENST00000603240
332 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AC007684.1-201
ENST00000609671
477 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AL353997.5-201
ENST00000618886
171 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
AP003400.5-201
ENST00000624827
617 nt
BASIC
2.08
□□□□□ -2.08
SDC3
O75056
CHORDC1-205
ENST00000529726
4805 nt
TSL 2
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
COMMD6-201
ENST00000355801
486 nt
TSL 2
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
RNU6-78P-201
ENST00000362897
107 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
Y_RNA.480-201
ENST00000384364
102 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
SNORA51.11-201
ENST00000384442
131 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
RNU1-57P-201
ENST00000384491
166 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
MIR95-201
ENST00000385072
81 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
MIR561-201
ENST00000385216
97 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
SNORA16.2-201
ENST00000390991
127 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
SNORD70.1-201
ENST00000391007
85 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
RNU2-66P-201
ENST00000410650
161 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AL353193.1-201
ENST00000421444
268 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC092839.1-201
ENST00000433475
536 nt
TSL 4
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC002386.1-201
ENST00000436714
398 nt
TSL 2
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
HMGB1P31-201
ENST00000437242
427 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AL451074.3-201
ENST00000437709
472 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
IPO7P1-201
ENST00000442031
636 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
LINC00395-202
ENST00000451570
415 nt
TSL 3
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC055764.1-201
ENST00000454526
473 nt
TSL 3
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
SNRPFP3-201
ENST00000457792
225 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
RNU7-63P-201
ENST00000459054
62 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC079804.2-201
ENST00000490376
200 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
MTCO3P7-201
ENST00000510008
774 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC110009.1-201
ENST00000512965
451 nt
TSL 5
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC126768.3-201
ENST00000514519
560 nt
TSL 4
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
RNU2-69P-201
ENST00000516061
100 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
IL7-206
ENST00000520269
456 nt
TSL 3
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AL137161.1-201
ENST00000532231
390 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
PARPBP-209
ENST00000537257
976 nt
TSL 1 (best)
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AL136038.2-201
ENST00000553983
283 nt
TSL 3
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC138625.1-201
ENST00000567556
483 nt
TSL 3
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
MTND1P15-201
ENST00000579262
949 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC090897.2-201
ENST00000581715
130 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
MIR3941-201
ENST00000582572
103 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
ZNF667-AS1-209
ENST00000601875
495 nt
TSL 3
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AL713866.2-201
ENST00000603579
219 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
AC091805.2-201
ENST00000603848
235 nt
BASIC
2.07
□□□□□ -2.08
SDC3
O75056
Z99129.1-201
ENST00000612510
255 nt
BASIC
2.07
□□□□□ -2.08
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Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms