Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC087683.1-201ENST00000591187 441 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AC025165.5-201ENST00000602802 578 ntBASIC2.1□□□□□ -2.07
SDC3O75056 NDUFA8P1-201ENST00000605525 367 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AC008536.2-201ENST00000607284 349 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AC093788.1-201ENST00000609356 927 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AC026585.1-201ENST00000619582 524 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AC048344.4-201ENST00000619744 527 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AL031601.2-202ENST00000622650 282 ntBASIC2.1□□□□□ -2.07
SDC3O75056 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SDC3O75056 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-1042P-201ENST00000384204 107 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-517P-201ENST00000384362 110 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-434P-201ENST00000384376 107 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-393P-201ENST00000384475 107 ntBASIC2.09□□□□□ -2.07
SDC3O75056 SNORD116-20-201ENST00000384529 92 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-903P-201ENST00000391270 109 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNA5SP390-201ENST00000410191 113 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AL663109.1-201ENST00000411498 844 ntBASIC2.09□□□□□ -2.07
SDC3O75056 OR9R1P-201ENST00000412200 877 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AC074117.2-201ENST00000417130 397 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AIMP1P2-201ENST00000425294 312 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.09□□□□□ -2.07
SDC3O75056 AC002486.1-201ENST00000435098 391 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.09□□□□□ -2.07
SDC3O75056 MTCYBP40-201ENST00000509390 1135 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNA5SP200-201ENST00000516360 103 ntBASIC2.09□□□□□ -2.07
SDC3O75056 RNU6-548P-201ENST00000517083 115 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.09□□□□□ -2.07
SDC3O75056 AC024909.2-201ENST00000553035 286 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.09□□□□□ -2.07
SDC3O75056 AC017083.3-201ENST00000609955 700 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
SDC3O75056 AC022418.1-201ENST00000624118 445 ntBASIC2.09□□□□□ -2.07
SDC3O75056 Z69720.2-201ENST00000624755 279 ntBASIC2.09□□□□□ -2.07
SDC3O75056 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.09□□□□□ -2.08
SDC3O75056 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SDC3O75056 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.08□□□□□ -2.08
SDC3O75056 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.08□□□□□ -2.08
SDC3O75056 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SDC3O75056 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
SDC3O75056 Y_RNA.1-201ENST00000352915 104 ntBASIC2.08□□□□□ -2.08
SDC3O75056 RNU6-552P-201ENST00000362869 119 ntBASIC2.08□□□□□ -2.08
SDC3O75056 Y_RNA.324-201ENST00000365165 102 ntBASIC2.08□□□□□ -2.08
SDC3O75056 Y_RNA.399-201ENST00000383955 105 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.08□□□□□ -2.08
SDC3O75056 UBE2V1P10-201ENST00000414685 269 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.08□□□□□ -2.08
SDC3O75056 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
SDC3O75056 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AC079140.5-201ENST00000507882 310 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.08□□□□□ -2.08
SDC3O75056 AP000889.2-201ENST00000532684 490 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.08□□□□□ -2.08
SDC3O75056 AP003034.1-201ENST00000534621 422 ntBASIC2.08□□□□□ -2.08
SDC3O75056 MTATP6P3-201ENST00000581686 676 ntBASIC2.08□□□□□ -2.08
SDC3O75056 RPL30P11-203ENST00000598995 310 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AC073410.2-201ENST00000603240 332 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AC007684.1-201ENST00000609671 477 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AL353997.5-201ENST00000618886 171 ntBASIC2.08□□□□□ -2.08
SDC3O75056 AP003400.5-201ENST00000624827 617 ntBASIC2.08□□□□□ -2.08
SDC3O75056 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.07□□□□□ -2.08
SDC3O75056 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
SDC3O75056 RNU6-78P-201ENST00000362897 107 ntBASIC2.07□□□□□ -2.08
SDC3O75056 Y_RNA.480-201ENST00000384364 102 ntBASIC2.07□□□□□ -2.08
SDC3O75056 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
SDC3O75056 RNU1-57P-201ENST00000384491 166 ntBASIC2.07□□□□□ -2.08
SDC3O75056 MIR95-201ENST00000385072 81 ntBASIC2.07□□□□□ -2.08
SDC3O75056 MIR561-201ENST00000385216 97 ntBASIC2.07□□□□□ -2.08
SDC3O75056 SNORA16.2-201ENST00000390991 127 ntBASIC2.07□□□□□ -2.08
SDC3O75056 SNORD70.1-201ENST00000391007 85 ntBASIC2.07□□□□□ -2.08
SDC3O75056 RNU2-66P-201ENST00000410650 161 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AL353193.1-201ENST00000421444 268 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.07□□□□□ -2.08
SDC3O75056 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.07□□□□□ -2.08
SDC3O75056 HMGB1P31-201ENST00000437242 427 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AL451074.3-201ENST00000437709 472 ntBASIC2.07□□□□□ -2.08
SDC3O75056 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
SDC3O75056 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC3O75056 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC3O75056 SNRPFP3-201ENST00000457792 225 ntBASIC2.07□□□□□ -2.08
SDC3O75056 RNU7-63P-201ENST00000459054 62 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
SDC3O75056 MTCO3P7-201ENST00000510008 774 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
SDC3O75056 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.07□□□□□ -2.08
SDC3O75056 RNU2-69P-201ENST00000516061 100 ntBASIC2.07□□□□□ -2.08
SDC3O75056 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC3O75056 AL137161.1-201ENST00000532231 390 ntBASIC2.07□□□□□ -2.08
SDC3O75056 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SDC3O75056 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC3O75056 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC3O75056 MTND1P15-201ENST00000579262 949 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
SDC3O75056 MIR3941-201ENST00000582572 103 ntBASIC2.07□□□□□ -2.08
SDC3O75056 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC3O75056 AL713866.2-201ENST00000603579 219 ntBASIC2.07□□□□□ -2.08
SDC3O75056 AC091805.2-201ENST00000603848 235 ntBASIC2.07□□□□□ -2.08
SDC3O75056 Z99129.1-201ENST00000612510 255 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms