Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 AL138955.1-201ENST00000622881 1040 ntBASIC1.12□□□□□ -2.23
SCN2BO60939 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
SCN2BO60939 AC100821.1-201ENST00000523153 2479 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SCN2BO60939 SNORA4.1-201ENST00000364263 144 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 SNORD114-6-201ENST00000364393 72 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 Y_RNA.332-201ENST00000365271 113 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 RNU6-296P-201ENST00000384608 107 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN2BO60939 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN2BO60939 RPS27P16-201ENST00000425758 201 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN2BO60939 EEF1A1P39-201ENST00000440791 250 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.11□□□□□ -2.23
SCN2BO60939 RPL39P29-201ENST00000447779 157 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AC009646.1-201ENST00000510455 318 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AC005741.1-201ENST00000511094 432 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 SNORA3.4-201ENST00000515969 96 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN2BO60939 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.11□□□□□ -2.23
SCN2BO60939 MIR4769-201ENST00000584126 77 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 MIR548AC-201ENST00000585049 88 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AL606834.3-201ENST00000602615 496 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 AL078604.3-201ENST00000615580 211 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
SCN2BO60939 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
SCN2BO60939 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
SCN2BO60939 RNU4-91P-201ENST00000364778 135 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SCN2BO60939 RNU6-1065P-201ENST00000384513 106 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 RAP1BP3-201ENST00000407180 549 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 AP1B1P2-201ENST00000416196 106 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN2BO60939 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 C8orf59P1-201ENST00000429930 303 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 AL008629.1-201ENST00000438615 184 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 GDI2P2-201ENST00000445131 608 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.1□□□□□ -2.23
SCN2BO60939 AC112206.3-201ENST00000514578 389 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 RNA5SP458-201ENST00000516188 119 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 SNORD60.2-201ENST00000516883 86 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.1□□□□□ -2.23
SCN2BO60939 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN2BO60939 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN2BO60939 BNIP3P31-201ENST00000604515 566 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 AL158032.1-201ENST00000605401 106 ntBASIC1.1□□□□□ -2.23
SCN2BO60939 MIR520A-201ENST00000384862 85 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 FGF7P8-201ENST00000402994 292 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.09□□□□□ -2.23
SCN2BO60939 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN2BO60939 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN2BO60939 HMGN2P18-201ENST00000450680 270 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN2BO60939 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN2BO60939 AC097473.1-201ENST00000508142 408 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.09□□□□□ -2.23
SCN2BO60939 SUMO2P18-201ENST00000518873 252 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 AC115990.1-201ENST00000526957 301 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.09□□□□□ -2.23
SCN2BO60939 BNIP3P6-201ENST00000549284 499 ntBASIC1.09□□□□□ -2.23
SCN2BO60939 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.09□□□□□ -2.23
SCN2BO60939 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SCN2BO60939 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.24
SCN2BO60939 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 RNU6-1179P-201ENST00000384667 107 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC004965.1-201ENST00000413033 213 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 MTATP6P20-201ENST00000414147 562 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC019070.1-201ENST00000415008 1024 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 EIF1P1-201ENST00000421436 341 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AL669831.1-202ENST00000428504 417 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 KATNBL1P3-201ENST00000443475 909 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AL358794.1-201ENST00000445689 381 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 FTH1P25-201ENST00000447665 469 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AL122001.1-201ENST00000457027 370 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AL163195.1-201ENST00000496941 348 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC108078.1-201ENST00000508073 725 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 SNORA19.3-201ENST00000516165 130 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC019176.1-201ENST00000518519 225 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.08□□□□□ -2.24
SCN2BO60939 AC090115.3-201ENST00000553218 849 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AL592221.1-201ENST00000605266 382 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC026585.1-201ENST00000619582 524 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 AC022513.1-201ENST00000624512 117 ntBASIC1.08□□□□□ -2.24
SCN2BO60939 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.08□□□□□ -2.24
SCN2BO60939 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SCN2BO60939 RNU6-1222P-201ENST00000384615 107 ntBASIC1.07□□□□□ -2.24
SCN2BO60939 AC123900.1-201ENST00000420390 96 ntBASIC1.07□□□□□ -2.24
SCN2BO60939 AL591043.1-201ENST00000432461 424 ntBASIC1.07□□□□□ -2.24
SCN2BO60939 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.07□□□□□ -2.24
SCN2BO60939 HSPE1P9-201ENST00000440046 311 ntBASIC1.07□□□□□ -2.24
SCN2BO60939 RPS27AP8-201ENST00000452665 445 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms