Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-201P-201ENST00000517100 61 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.34□□□□□ -2.19
SHOX2O60902 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.34□□□□□ -2.19
SHOX2O60902 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.34□□□□□ -2.19
SHOX2O60902 AC025678.1-201ENST00000567861 338 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 MTCYBP33-201ENST00000575007 1130 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 AC069431.2-201ENST00000604149 1099 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 AC010900.2-201ENST00000604508 210 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 AP000860.1-201ENST00000605250 559 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 AL158042.1-201ENST00000605338 460 ntBASIC1.34□□□□□ -2.19
SHOX2O60902 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SHOX2O60902 AC092809.3-201ENST00000415453 231 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AL353777.1-201ENST00000425552 326 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AC098934.3-201ENST00000430450 190 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AL008629.1-201ENST00000438615 184 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.33□□□□□ -2.2
SHOX2O60902 AP001025.1-201ENST00000486139 332 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.33□□□□□ -2.2
SHOX2O60902 RN7SKP179-201ENST00000516126 217 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 RNU6-1003P-201ENST00000517099 105 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.33□□□□□ -2.2
SHOX2O60902 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.33□□□□□ -2.2
SHOX2O60902 MIR4307-201ENST00000582802 84 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AL355816.2-201ENST00000610049 647 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AL359547.2-201ENST00000615810 418 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 U6.42-201ENST00000618440 107 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AC009269.6-201ENST00000621778 588 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AC007792.1-201ENST00000623023 402 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 AC100821.1-201ENST00000523153 2479 ntBASIC1.33□□□□□ -2.2
SHOX2O60902 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
SHOX2O60902 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.32□□□□□ -2.2
SHOX2O60902 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHOX2O60902 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.32□□□□□ -2.2
SHOX2O60902 RNU6-1105P-201ENST00000384774 107 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 SNORA48.1-201ENST00000390879 135 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 RNU2-41P-201ENST00000410991 178 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 RPL23AP30-201ENST00000432419 501 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 HMGB1P31-201ENST00000437242 427 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.32□□□□□ -2.2
SHOX2O60902 AL031313.1-201ENST00000448435 256 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 AC114801.2-201ENST00000503825 781 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 Y_RNA.689-201ENST00000516589 107 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 AC105185.1-201ENST00000518705 535 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.32□□□□□ -2.2
SHOX2O60902 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHOX2O60902 TRAV32-201ENST00000553993 340 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.32□□□□□ -2.2
SHOX2O60902 SNORD53B-201ENST00000577887 78 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
SHOX2O60902 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SHOX2O60902 MIR424-201ENST00000362227 98 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 RNU6-212P-201ENST00000362642 104 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 RNU6-944P-201ENST00000364023 107 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 SNORD14B-201ENST00000364533 90 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 SNORD116-20-201ENST00000384529 92 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.31□□□□□ -2.2
SHOX2O60902 CBX3P6-201ENST00000430257 527 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.31□□□□□ -2.2
SHOX2O60902 MTCYBP18-201ENST00000501056 747 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 MTCYBP40-201ENST00000509390 1135 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.31□□□□□ -2.2
SHOX2O60902 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.31□□□□□ -2.2
SHOX2O60902 AC103987.3-201ENST00000582071 292 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 AC121334.2-201ENST00000605387 271 ntBASIC1.31□□□□□ -2.2
SHOX2O60902 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.3□□□□□ -2.2
SHOX2O60902 MIR10A-201ENST00000385043 110 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 AL354941.1-201ENST00000438600 464 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 CALM1P1-201ENST00000442082 433 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 MTND1P12-201ENST00000455231 147 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.3□□□□□ -2.2
SHOX2O60902 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.3□□□□□ -2.2
SHOX2O60902 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.3□□□□□ -2.2
SHOX2O60902 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.3□□□□□ -2.2
SHOX2O60902 AC123912.5-201ENST00000605470 343 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 AC108747.1-201ENST00000609508 535 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 MIR6788-201ENST00000618842 66 ntBASIC1.3□□□□□ -2.2
SHOX2O60902 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.3□□□□□ -2.2
SHOX2O60902 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.3□□□□□ -2.2
SHOX2O60902 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SHOX2O60902 RNU6-60P-201ENST00000364792 103 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 RNU6-174P-201ENST00000410406 106 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 AL590556.1-201ENST00000423231 483 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.29□□□□□ -2.2
SHOX2O60902 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.29□□□□□ -2.2
SHOX2O60902 snoU109.2-201ENST00000459316 135 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 AC108078.1-201ENST00000508073 725 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 AC093259.1-201ENST00000509755 300 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 AC112206.3-201ENST00000514578 389 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 RNU7-51P-201ENST00000516560 62 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 RNU6-965P-201ENST00000516721 96 ntBASIC1.29□□□□□ -2.2
SHOX2O60902 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms