Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.62□□□□□ -1.99
LMX1BO60663 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
LMX1BO60663 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.62□□□□□ -1.99
LMX1BO60663 AC002546.1-201ENST00000588041 2504 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1BO60663 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LMX1BO60663 FTLP6-201ENST00000355274 422 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 RNU6-490P-201ENST00000362985 107 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 Y_RNA.158-201ENST00000363651 101 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 SNORA54-201ENST00000384281 123 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LMX1BO60663 RNU6-1197P-201ENST00000391183 107 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 RNU6-985P-201ENST00000410182 104 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 AL117339.3-201ENST00000418733 162 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 MRPS18CP6-201ENST00000423587 223 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 BX276092.3-201ENST00000424182 230 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 AL627311.1-201ENST00000431514 115 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1BO60663 AC244505.4-201ENST00000434905 287 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 SNRPEP9-201ENST00000436794 238 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 NDUFB4P6-201ENST00000436819 366 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 SSXP5-201ENST00000443473 287 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 AC013470.1-201ENST00000453438 462 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 MTND5P22-201ENST00000458380 195 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 AC091179.1-201ENST00000461606 579 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.61□□□□□ -1.99
LMX1BO60663 Y_RNA.720-201ENST00000517166 92 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMX1BO60663 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1BO60663 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.61□□□□□ -1.99
LMX1BO60663 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1BO60663 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.61□□□□□ -1.99
LMX1BO60663 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1BO60663 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1BO60663 AC083806.3-201ENST00000614016 455 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.61□□□□□ -1.99
LMX1BO60663 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1BO60663 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.61□□□□□ -1.99
LMX1BO60663 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.61□□□□□ -1.99
LMX1BO60663 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LMX1BO60663 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LMX1BO60663 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.61□□□□□ -1.99
LMX1BO60663 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
LMX1BO60663 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LMX1BO60663 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LMX1BO60663 MTND5P16-201ENST00000460269 1703 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 Y_RNA.2-201ENST00000362330 96 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 RNU6-217P-201ENST00000384164 104 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 Y_RNA.459-201ENST00000384251 102 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 MIR10A-201ENST00000385043 110 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AL031121.1-201ENST00000406553 254 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 MIR548F4-201ENST00000408515 105 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 RNU6-293P-201ENST00000411259 106 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.6□□□□□ -1.99
LMX1BO60663 YPEL5P1-201ENST00000419731 367 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.6□□□□□ -1.99
LMX1BO60663 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.6□□□□□ -1.99
LMX1BO60663 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.6□□□□□ -1.99
LMX1BO60663 AC011816.1-201ENST00000441346 546 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.6□□□□□ -1.99
LMX1BO60663 PCMTD1P1-201ENST00000455560 355 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AC018437.1-201ENST00000492214 406 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AC022447.4-201ENST00000504053 364 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.6□□□□□ -1.99
LMX1BO60663 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.6□□□□□ -1.99
LMX1BO60663 RNU6-572P-201ENST00000516724 80 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.6□□□□□ -1.99
LMX1BO60663 CYCSP39-201ENST00000565821 309 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AC109446.1-201ENST00000566172 220 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 MIR4672-201ENST00000583126 81 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AC104695.3-201ENST00000604052 296 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AC005014.2-201ENST00000607795 599 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 AL110115.1-201ENST00000614396 364 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 MIR622-201ENST00000638396 96 ntBASIC2.6□□□□□ -1.99
LMX1BO60663 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LMX1BO60663 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.6□□□□□ -1.99
LMX1BO60663 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.6□□□□□ -1.99
LMX1BO60663 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LMX1BO60663 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LMX1BO60663 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.59□□□□□ -1.99
LMX1BO60663 Y_RNA.48-201ENST00000362710 103 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 RNU6-140P-201ENST00000384566 108 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 RNU2-68P-201ENST00000410878 191 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 RN7SKP284-201ENST00000411002 343 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.59□□□□□ -1.99
LMX1BO60663 AC093151.1-201ENST00000427711 313 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.59□□□□□ -1.99
LMX1BO60663 CHEK2P4-201ENST00000450340 246 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 RPL12P25-201ENST00000455592 494 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 AC008571.1-201ENST00000467232 300 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 RPL30P5-201ENST00000494923 336 ntBASIC2.59□□□□□ -1.99
LMX1BO60663 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.59□□□□□ -1.99
LMX1BO60663 SNORA25.10-201ENST00000515926 124 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 270.3 ms