Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 HMGN2P10-201ENST00000448085 265 ntBASIC2.54□□□□□ -2
PRKNO60260 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKNO60260 AC090525.1-201ENST00000479116 478 ntBASIC2.54□□□□□ -2
PRKNO60260 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.54□□□□□ -2
PRKNO60260 RN7SL283P-201ENST00000489055 303 ntBASIC2.54□□□□□ -2
PRKNO60260 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.54□□□□□ -2
PRKNO60260 RPL23AP94-201ENST00000512518 302 ntBASIC2.54□□□□□ -2
PRKNO60260 AP004607.1-201ENST00000524456 203 ntBASIC2.54□□□□□ -2
PRKNO60260 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKNO60260 IMMP1LP2-201ENST00000552954 492 ntBASIC2.54□□□□□ -2
PRKNO60260 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
PRKNO60260 AL121821.2-201ENST00000556081 394 ntBASIC2.54□□□□□ -2
PRKNO60260 AC021739.1-201ENST00000559631 174 ntBASIC2.54□□□□□ -2
PRKNO60260 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.54□□□□□ -2
PRKNO60260 MIR4513-201ENST00000581077 86 ntBASIC2.54□□□□□ -2
PRKNO60260 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
PRKNO60260 AP000787.2-201ENST00000604432 568 ntBASIC2.54□□□□□ -2
PRKNO60260 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.54□□□□□ -2
PRKNO60260 AC244517.12-201ENST00000623581 663 ntBASIC2.54□□□□□ -2
PRKNO60260 MIR3199-2-201ENST00000636243 86 ntBASIC2.54□□□□□ -2
PRKNO60260 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PRKNO60260 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.53□□□□□ -2
PRKNO60260 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
PRKNO60260 Y_RNA.259-201ENST00000364619 101 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU6-1280P-201ENST00000365211 107 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU1-100P-201ENST00000365255 165 ntBASIC2.53□□□□□ -2
PRKNO60260 Y_RNA.419-201ENST00000384041 102 ntBASIC2.53□□□□□ -2
PRKNO60260 Y_RNA.473-201ENST00000384333 102 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU6-1297P-201ENST00000384415 104 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU6-1106P-201ENST00000390845 107 ntBASIC2.53□□□□□ -2
PRKNO60260 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.53□□□□□ -2
PRKNO60260 AC023141.4-201ENST00000412031 328 ntBASIC2.53□□□□□ -2
PRKNO60260 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.53□□□□□ -2
PRKNO60260 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
PRKNO60260 RPS15AP5-201ENST00000436276 388 ntBASIC2.53□□□□□ -2
PRKNO60260 RPL23AP58-201ENST00000440453 469 ntBASIC2.53□□□□□ -2
PRKNO60260 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
PRKNO60260 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU7-23P-201ENST00000459465 62 ntBASIC2.53□□□□□ -2
PRKNO60260 AK3P2-201ENST00000507976 429 ntBASIC2.53□□□□□ -2
PRKNO60260 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
PRKNO60260 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.53□□□□□ -2
PRKNO60260 AC113155.1-201ENST00000511141 769 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU6-377P-201ENST00000515965 102 ntBASIC2.53□□□□□ -2
PRKNO60260 RNU1-54P-201ENST00000517181 120 ntBASIC2.53□□□□□ -2
PRKNO60260 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.53□□□□□ -2
PRKNO60260 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
PRKNO60260 APOOP3-201ENST00000536787 586 ntBASIC2.53□□□□□ -2
PRKNO60260 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.53□□□□□ -2
PRKNO60260 TRAV32-201ENST00000553993 340 ntBASIC2.53□□□□□ -2
PRKNO60260 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.53□□□□□ -2
PRKNO60260 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.53□□□□□ -2
PRKNO60260 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.53□□□□□ -2
PRKNO60260 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKNO60260 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.53□□□□□ -2
PRKNO60260 AL161423.1-201ENST00000613700 262 ntBASIC2.53□□□□□ -2
PRKNO60260 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.53□□□□□ -2
PRKNO60260 AC099654.10-201ENST00000640395 161 ntBASIC2.53□□□□□ -2
PRKNO60260 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.53□□□□□ -2
PRKNO60260 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRKNO60260 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PRKNO60260 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2.01
PRKNO60260 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
PRKNO60260 AC008264.2-201ENST00000610193 3731 ntBASIC2.52□□□□□ -2.01
PRKNO60260 RNU6-858P-201ENST00000362436 107 ntBASIC2.52□□□□□ -2.01
PRKNO60260 Y_RNA.482-201ENST00000384377 111 ntBASIC2.52□□□□□ -2.01
PRKNO60260 MIR517A-201ENST00000385001 87 ntBASIC2.52□□□□□ -2.01
PRKNO60260 RNU2-49P-201ENST00000410666 184 ntBASIC2.52□□□□□ -2.01
PRKNO60260 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
PRKNO60260 RNU6-325P-201ENST00000411132 105 ntBASIC2.52□□□□□ -2.01
PRKNO60260 RNU6-293P-201ENST00000411259 106 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AL030996.1-201ENST00000411430 235 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AL117339.3-201ENST00000418733 162 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKNO60260 AL645568.3-201ENST00000433683 316 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AC236972.2-201ENST00000434979 310 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKNO60260 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKNO60260 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.52□□□□□ -2.01
PRKNO60260 SNORD19B-201ENST00000459623 84 ntBASIC2.52□□□□□ -2.01
PRKNO60260 UBE2DNL-203ENST00000474922 222 ntBASIC2.52□□□□□ -2.01
PRKNO60260 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKNO60260 SNORA43.2-201ENST00000516652 128 ntBASIC2.52□□□□□ -2.01
PRKNO60260 RNU6-1016P-201ENST00000516689 94 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AC109479.2-201ENST00000517842 174 ntBASIC2.52□□□□□ -2.01
PRKNO60260 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKNO60260 AC006199.1-201ENST00000548728 219 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKNO60260 AC009314.1-201ENST00000603871 304 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AL627309.6-201ENST00000606857 840 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AL050343.2-201ENST00000607338 280 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AC019193.3-201ENST00000609144 554 ntBASIC2.52□□□□□ -2.01
PRKNO60260 AC090574.1-201ENST00000623186 233 ntBASIC2.52□□□□□ -2.01
PRKNO60260 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKNO60260 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKNO60260 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PRKNO60260 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKNO60260 CDC27P3-201ENST00000635418 1910 ntBASIC2.51□□□□□ -2.01
PRKNO60260 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms