Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.69□□□□□ -2.3
PDE6DO43924 RPS3AP36-201ENST00000398190 775 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 RN7SKP61-201ENST00000410642 295 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 RPS25P9-201ENST00000435591 252 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 AL117351.1-201ENST00000438864 766 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.69□□□□□ -2.3
PDE6DO43924 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.69□□□□□ -2.3
PDE6DO43924 HMGN2P9-201ENST00000476875 229 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.69□□□□□ -2.3
PDE6DO43924 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.69□□□□□ -2.3
PDE6DO43924 RNU5F-2P-201ENST00000516066 82 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 Y_RNA.689-201ENST00000516589 107 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 RNA5SP503-201ENST00000517047 117 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.69□□□□□ -2.3
PDE6DO43924 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.69□□□□□ -2.3
PDE6DO43924 MIR3664-201ENST00000579074 99 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 MIR4303-201ENST00000581299 66 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.69□□□□□ -2.3
PDE6DO43924 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 AL353770.2-201ENST00000620024 78 ntBASIC0.69□□□□□ -2.3
PDE6DO43924 RNU6-1019P-201ENST00000364424 107 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 RNU5E-6P-201ENST00000365574 115 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 RNU6-331P-201ENST00000384724 107 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 RNU6-1176P-201ENST00000390955 107 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 SNORA12-201ENST00000391162 147 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.68□□□□□ -2.3
PDE6DO43924 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.68□□□□□ -2.3
PDE6DO43924 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.68□□□□□ -2.3
PDE6DO43924 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.68□□□□□ -2.3
PDE6DO43924 AC009474.2-201ENST00000451383 136 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.68□□□□□ -2.3
PDE6DO43924 TRBV12-1-201ENST00000479785 344 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.68□□□□□ -2.3
PDE6DO43924 MIR3146-201ENST00000580367 79 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 AC008088.1-201ENST00000580993 280 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.68□□□□□ -2.3
PDE6DO43924 AC018889.1-201ENST00000605372 397 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 RNU6-87P-201ENST00000607561 108 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.68□□□□□ -2.3
PDE6DO43924 AL512427.1-201ENST00000618593 349 ntBASIC0.68□□□□□ -2.3
PDE6DO43924 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.67□□□□□ -2.3
PDE6DO43924 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.67□□□□□ -2.3
PDE6DO43924 RNU6-511P-201ENST00000363496 107 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 SNORA7.1-201ENST00000363750 139 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 RNY3P13-201ENST00000365542 102 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 RNU2-64P-201ENST00000411315 191 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.67□□□□□ -2.3
PDE6DO43924 MTCO3P41-201ENST00000414801 328 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 MTND4P20-201ENST00000424125 869 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 SNRPEP8-201ENST00000442866 260 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 AC109445.1-201ENST00000512356 383 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.67□□□□□ -2.3
PDE6DO43924 LRRC6P1-201ENST00000532188 885 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.67□□□□□ -2.3
PDE6DO43924 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 AC009712.1-201ENST00000564938 316 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.67□□□□□ -2.3
PDE6DO43924 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.67□□□□□ -2.3
PDE6DO43924 U6.42-201ENST00000618440 107 ntBASIC0.67□□□□□ -2.3
PDE6DO43924 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.67□□□□□ -2.3
PDE6DO43924 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
PDE6DO43924 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.66□□□□□ -2.3
PDE6DO43924 RNU6-769P-201ENST00000384407 104 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AC004965.1-201ENST00000413033 213 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AC007969.2-201ENST00000441891 191 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 ART2BP-201ENST00000453501 499 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 snoU13.27-201ENST00000459278 104 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 PSMC1P5-201ENST00000512850 177 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
PDE6DO43924 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.66□□□□□ -2.3
PDE6DO43924 BCRP9-201ENST00000605312 388 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 MIR3976-201ENST00000606807 139 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AL451064.1-201ENST00000607718 471 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.66□□□□□ -2.3
PDE6DO43924 AC091948.2-201ENST00000636510 279 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AC068647.2-201ENST00000637380 353 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
PDE6DO43924 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.65□□□□□ -2.3
PDE6DO43924 RNU4-15P-201ENST00000362613 141 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 RNU6-862P-201ENST00000362804 105 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 RNU6-960P-201ENST00000364056 120 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 SNORA4.1-201ENST00000364263 144 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 RNU6-384P-201ENST00000364900 104 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 MIR515-2-201ENST00000384883 83 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 MIR515-1-201ENST00000384884 83 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 MIR222-201ENST00000384992 110 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 AL356776.1-201ENST00000406574 447 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 RNU2-62P-201ENST00000410868 191 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.65□□□□□ -2.31
PDE6DO43924 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.65□□□□□ -2.31
PDE6DO43924 AL008629.1-201ENST00000438615 184 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.65□□□□□ -2.31
PDE6DO43924 BTBD7P2-201ENST00000441962 620 ntBASIC0.65□□□□□ -2.31
PDE6DO43924 RPS27P1-201ENST00000450552 247 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms