Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC092451.2-201ENST00000538746 658 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 AL161670.1-201ENST00000554348 137 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.89□□□□□ -2.27
SSNA1O43805 MZT1P2-201ENST00000604387 248 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 AC026585.1-201ENST00000619582 524 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 MIR8065-201ENST00000620577 100 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 AC099654.5-201ENST00000636479 350 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.89□□□□□ -2.27
SSNA1O43805 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
SSNA1O43805 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SSNA1O43805 SNORD114-1-201ENST00000362705 72 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 U8.2-201ENST00000363156 134 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 RNU1-22P-201ENST00000363334 158 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 Y_RNA.333-201ENST00000365274 102 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 RNU6-331P-201ENST00000384724 107 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 MIR544A-201ENST00000384855 91 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 RPS20P2-201ENST00000402520 389 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 RNU4-26P-201ENST00000410270 107 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 MTCO3P41-201ENST00000414801 328 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 MTND4P20-201ENST00000424125 869 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 AL360271.2-201ENST00000447710 161 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 AC132479.1-201ENST00000449160 144 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 ATP5EP1-201ENST00000510257 156 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 MTCO3P28-201ENST00000513351 515 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 RNU1-86P-201ENST00000516108 154 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 RNU1-107P-201ENST00000516617 154 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.88□□□□□ -2.27
SSNA1O43805 AL034555.1-201ENST00000604816 211 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 BNIP3P19-201ENST00000605397 577 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 AL365434.2-201ENST00000607979 234 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 AC097372.5-201ENST00000623665 376 ntBASIC0.88□□□□□ -2.27
SSNA1O43805 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SSNA1O43805 RNU6-1257P-201ENST00000384625 110 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.87□□□□□ -2.27
SSNA1O43805 AC019070.1-201ENST00000415008 1024 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 RPS3AP37-201ENST00000419176 745 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.87□□□□□ -2.27
SSNA1O43805 PGBD4P5-201ENST00000445958 426 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.87□□□□□ -2.27
SSNA1O43805 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.87□□□□□ -2.27
SSNA1O43805 RPS23P4-201ENST00000487908 423 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 RNU6-123P-201ENST00000516163 102 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 RNU6-295P-201ENST00000516901 104 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.87□□□□□ -2.27
SSNA1O43805 AP003168.1-201ENST00000530091 307 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.87□□□□□ -2.27
SSNA1O43805 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.87□□□□□ -2.27
SSNA1O43805 MIR4435-1-201ENST00000582552 80 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 MIR4307-201ENST00000582802 84 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AC023043.2-201ENST00000589678 1026 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AC012409.4-201ENST00000612923 249 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AC092140.2-201ENST00000618027 521 ntBASIC0.87□□□□□ -2.27
SSNA1O43805 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.87□□□□□ -2.27
SSNA1O43805 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SSNA1O43805 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.86□□□□□ -2.27
SSNA1O43805 MTND4P16-201ENST00000466108 1367 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 RNY4P24-201ENST00000362735 96 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 RNU6-862P-201ENST00000362804 105 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 RNU6-1285P-201ENST00000363480 105 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 RNU6-1222P-201ENST00000384615 107 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 SNORA12.2-201ENST00000391040 156 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.86□□□□□ -2.27
SSNA1O43805 AC006366.1-201ENST00000422002 759 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 AL353777.1-201ENST00000425552 326 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.86□□□□□ -2.27
SSNA1O43805 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.86□□□□□ -2.27
SSNA1O43805 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.86□□□□□ -2.27
SSNA1O43805 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.86□□□□□ -2.27
SSNA1O43805 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
SSNA1O43805 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.86□□□□□ -2.27
SSNA1O43805 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.86□□□□□ -2.27
SSNA1O43805 RNA5SP481-201ENST00000516814 122 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 SNORD60.2-201ENST00000516883 86 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 MTND2P7-201ENST00000521337 640 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.86□□□□□ -2.27
SSNA1O43805 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.86□□□□□ -2.27
SSNA1O43805 DNAJC19P9-201ENST00000555084 351 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.86□□□□□ -2.27
SSNA1O43805 AC110760.3-201ENST00000598794 467 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 MIR3976-201ENST00000606807 139 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 AC080013.3-201ENST00000606839 578 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 AL451064.1-201ENST00000607718 471 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 AC083806.3-201ENST00000614016 455 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
SSNA1O43805 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SSNA1O43805 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SSNA1O43805 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 SNORA63D-201ENST00000364359 132 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 MIR194-1-201ENST00000384892 85 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 MTATP6P20-201ENST00000414147 562 ntBASIC0.85□□□□□ -2.27
SSNA1O43805 RPL22P18-201ENST00000417197 377 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms