Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CHMP2AO43633 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CHMP2AO43633 U8.3-201ENST00000363321 132 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 RNU6-641P-201ENST00000384006 107 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 RNU6-611P-201ENST00000384276 104 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 RNU6-843P-201ENST00000384454 104 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 RNU6-1179P-201ENST00000384667 107 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CHMP2AO43633 HIGD1AP15-201ENST00000416198 280 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP2AO43633 UBE2V1P4-201ENST00000425374 344 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.59□□□□□ -2.15
CHMP2AO43633 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.59□□□□□ -2.15
CHMP2AO43633 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP2AO43633 MTATP6P16-201ENST00000434543 526 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP2AO43633 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.59□□□□□ -2.15
CHMP2AO43633 AL022238.1-201ENST00000442557 355 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 MTND2P4-201ENST00000445034 1004 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.59□□□□□ -2.15
CHMP2AO43633 AP001025.1-201ENST00000486139 332 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.59□□□□□ -2.15
CHMP2AO43633 AC005178.1-201ENST00000508392 440 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 AC096745.1-201ENST00000509945 370 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.59□□□□□ -2.15
CHMP2AO43633 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.59□□□□□ -2.15
CHMP2AO43633 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.59□□□□□ -2.15
CHMP2AO43633 RPL21P5-201ENST00000554662 472 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 AC008521.1-201ENST00000587471 187 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 RMST_6.1-201ENST00000611980 203 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 AC009878.1-201ENST00000621819 340 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 MIR3529-201ENST00000637713 78 ntBASIC1.59□□□□□ -2.15
CHMP2AO43633 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
CHMP2AO43633 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHMP2AO43633 RNU6-61P-201ENST00000365528 109 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 RNU6-395P-201ENST00000365662 106 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 RNU6-72P-201ENST00000384285 79 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CHMP2AO43633 MTND2P9-201ENST00000422293 931 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.58□□□□□ -2.16
CHMP2AO43633 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.58□□□□□ -2.16
CHMP2AO43633 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 SNORA3.4-201ENST00000515969 96 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AC060788.1-201ENST00000521318 469 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AC011979.2-201ENST00000527568 352 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.58□□□□□ -2.16
CHMP2AO43633 AC008015.1-201ENST00000555505 465 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AL670379.2-201ENST00000604983 252 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AL670379.4-201ENST00000605279 254 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 FRG1KP-201ENST00000623592 341 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AC019226.2-201ENST00000625973 424 ntBASIC1.58□□□□□ -2.16
CHMP2AO43633 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.58□□□□□ -2.16
CHMP2AO43633 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CHMP2AO43633 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CHMP2AO43633 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHMP2AO43633 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 RNU6-169P-201ENST00000365336 107 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.57□□□□□ -2.16
CHMP2AO43633 SNORD116-20-201ENST00000384529 92 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 MIR558-201ENST00000384920 94 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CHMP2AO43633 BTF3L4P2-201ENST00000392798 346 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
CHMP2AO43633 AC009310.1-201ENST00000414414 451 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC006366.1-201ENST00000422002 759 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.57□□□□□ -2.16
CHMP2AO43633 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.57□□□□□ -2.16
CHMP2AO43633 AC245102.2-201ENST00000448956 180 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AL121594.1-201ENST00000475906 575 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC027575.1-201ENST00000481064 460 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 Y_RNA.672-201ENST00000516289 104 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.57□□□□□ -2.16
CHMP2AO43633 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.57□□□□□ -2.16
CHMP2AO43633 ADI1P3-201ENST00000549509 470 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.57□□□□□ -2.16
CHMP2AO43633 MTATP6P24-201ENST00000576835 677 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC073539.2-201ENST00000597113 165 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC022022.2-201ENST00000602989 360 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 snoU13.31-201ENST00000607291 104 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AL022345.1-201ENST00000607292 135 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AL451064.1-201ENST00000607718 471 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC093648.1-201ENST00000623546 606 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 AC007494.3-201ENST00000624660 743 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 HAUS6P2-201ENST00000433254 2404 ntBASIC1.57□□□□□ -2.16
CHMP2AO43633 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHMP2AO43633 RNU1-58P-201ENST00000362413 163 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RNU6-655P-201ENST00000362858 107 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RNY4P34-201ENST00000364779 95 ntBASIC1.56□□□□□ -2.16
CHMP2AO43633 RPS3AP36-201ENST00000398190 775 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms