Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3□□□□□ -1.93
SMAD6O43541 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
SMAD6O43541 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SMAD6O43541 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 MRPS18CP6-201ENST00000423587 223 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 MTCO1P39-201ENST00000426148 480 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AL645568.3-201ENST00000433683 316 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.99□□□□□ -1.93
SMAD6O43541 AL121871.1-201ENST00000443413 436 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AL360271.2-201ENST00000447710 161 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
SMAD6O43541 RNU7-138P-201ENST00000459479 64 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 RPL37P6-201ENST00000460682 294 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC010655.3-201ENST00000478818 450 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AL049873.1-201ENST00000480540 376 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.99□□□□□ -1.93
SMAD6O43541 SCGB1D5P-201ENST00000515134 247 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 RNU4-77P-201ENST00000516692 156 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 RNU6-914P-201ENST00000516749 109 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC104576.1-201ENST00000524225 88 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC007536.1-201ENST00000533382 349 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.99□□□□□ -1.93
SMAD6O43541 MYL12BP1-201ENST00000569826 507 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 LARP7P3-201ENST00000579888 337 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 SNORD58B-201ENST00000607313 66 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 AL353748.2-201ENST00000622148 471 ntBASIC2.99□□□□□ -1.93
SMAD6O43541 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.99□□□□□ -1.93
SMAD6O43541 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SMAD6O43541 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
SMAD6O43541 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMAD6O43541 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMAD6O43541 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SMAD6O43541 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNU6-1329P-201ENST00000365664 107 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 Y_RNA.476-201ENST00000384347 108 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 Y_RNA.480-201ENST00000384364 102 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 SNORA41-201ENST00000384675 132 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 MIR578-201ENST00000384828 96 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 MIR517A-201ENST00000385001 87 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 SNORD73A-201ENST00000386062 65 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNU2-23P-201ENST00000410545 195 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RN7SKP123-201ENST00000410732 291 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNA5SP492-201ENST00000411330 114 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 COTL1P1-201ENST00000422309 375 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 UBE2V1P4-201ENST00000425374 344 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 HMGB1P9-201ENST00000429856 646 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 USP9YP16-201ENST00000430287 407 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 AC025750.2-201ENST00000442609 450 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 USP9YP23-201ENST00000455085 407 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.98□□□□□ -1.93
SMAD6O43541 MRPS35P2-201ENST00000508242 191 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 MTND3P25-201ENST00000509243 135 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RAC1P5-201ENST00000512182 576 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNU6-307P-201ENST00000516743 106 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNU6-264P-201ENST00000517134 104 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 AP000867.2-201ENST00000532468 320 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 AC109446.1-201ENST00000566172 220 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 AC019159.1-201ENST00000605094 187 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 RNU6-85P-201ENST00000605989 107 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 MIR4275-201ENST00000636486 87 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SMAD6O43541 AC008264.2-201ENST00000610193 3731 ntBASIC2.98□□□□□ -1.93
SMAD6O43541 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMAD6O43541 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMAD6O43541 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMAD6O43541 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.97□□□□□ -1.93
SMAD6O43541 RNU6-99P-201ENST00000364721 107 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 Y_RNA.512-201ENST00000384518 102 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 Y_RNA.534-201ENST00000384599 112 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 RNU6-823P-201ENST00000391042 103 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 RNU6-101P-201ENST00000410323 104 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.97□□□□□ -1.93
SMAD6O43541 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 HMGB1P27-201ENST00000431429 603 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.97□□□□□ -1.93
SMAD6O43541 RPL26P6-201ENST00000440913 438 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 AL135938.1-201ENST00000443141 297 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 CECR9-201ENST00000453421 199 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 AL353752.1-201ENST00000454946 260 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 RPL31P60-201ENST00000478450 367 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 AC068781.1-201ENST00000488231 618 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 RN7SL633P-201ENST00000488974 297 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 Y_RNA.721-201ENST00000517207 102 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.97□□□□□ -1.93
SMAD6O43541 MIR5692A1-201ENST00000580523 69 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 AC005899.2-201ENST00000584353 90 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 HSPE1P7-201ENST00000604681 321 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 AP002826.1-201ENST00000608835 315 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SMAD6O43541 AL031601.2-202ENST00000622650 282 ntBASIC2.97□□□□□ -1.93
SMAD6O43541 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMAD6O43541 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SMAD6O43541 AL035425.3-201ENST00000564206 4996 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 Y_RNA.39-201ENST00000362620 98 ntBASIC2.96□□□□□ -1.94
SMAD6O43541 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms