Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 Y_RNA.529-201ENST00000384586 119 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AL078595.1-201ENST00000404458 226 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 MIR548F5-201ENST00000408421 86 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RNU2-23P-201ENST00000410545 195 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AC244505.4-201ENST00000434905 287 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF3O43395 SSXP5-201ENST00000443473 287 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AP001324.2-201ENST00000461163 319 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RPL9P9-202ENST00000466501 579 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AP001025.1-201ENST00000486139 332 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 MTND3P22-201ENST00000510932 243 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RNU1-54P-201ENST00000517181 120 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF3O43395 RAB11AP2-201ENST00000545905 639 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AC107016.2-201ENST00000547968 190 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 TRAV32-201ENST00000553993 340 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF3O43395 AC027176.1-201ENST00000560204 514 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RPS3AP23-202ENST00000574601 686 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 CPDP1-201ENST00000579660 283 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF3O43395 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF3O43395 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF3O43395 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF3O43395 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF3O43395 RNU6-227P-201ENST00000362865 103 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RNU6-428P-201ENST00000362942 107 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RNU6-529P-201ENST00000363383 104 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RNU6-1141P-201ENST00000364520 107 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 SNORA44-201ENST00000384584 132 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RNU6-95P-201ENST00000384697 107 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 BTF3L4P2-201ENST00000392798 346 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AL513475.1-201ENST00000406602 315 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 MIR548K-201ENST00000408406 116 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RN7SKP58-201ENST00000411010 305 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AC097463.2-201ENST00000421074 142 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF3O43395 AL590632.1-201ENST00000424289 371 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AL139132.1-201ENST00000431587 344 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF3O43395 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF3O43395 PCMTD1P1-201ENST00000455560 355 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RPS29P26-201ENST00000477483 171 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AC083906.5-201ENST00000503722 328 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF3O43395 SCGB1D5P-201ENST00000515134 247 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF3O43395 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF3O43395 AL133215.3-201ENST00000609801 448 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 AL132765.2-201ENST00000610812 351 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.35□□□□□ -1.87
PRPF3O43395 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF3O43395 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF3O43395 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF3O43395 SNORA48.2-201ENST00000390926 124 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRPF3O43395 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.34□□□□□ -1.87
PRPF3O43395 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF3O43395 AC022018.1-201ENST00000430685 241 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF3O43395 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF3O43395 snoU13.14-201ENST00000459372 104 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AP004217.1-201ENST00000480579 346 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 FGF7P4-201ENST00000509595 295 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AC008549.1-201ENST00000512900 643 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.34□□□□□ -1.87
PRPF3O43395 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF3O43395 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF3O43395 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF3O43395 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF3O43395 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF3O43395 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF3O43395 AL117336.2-201ENST00000602435 335 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AP001836.1-201ENST00000604675 523 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AC124303.1-201ENST00000605703 360 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AC009233.1-201ENST00000616477 371 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 AC112487.2-201ENST00000637950 304 ntBASIC3.34□□□□□ -1.87
PRPF3O43395 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PRPF3O43395 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PRPF3O43395 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRPF3O43395 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF3O43395 RNU6-797P-201ENST00000363101 109 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 UBA52P6-201ENST00000399822 382 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 U6atac.2-201ENST00000408644 118 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 RN7SKP158-201ENST00000410453 326 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 EIF1AXP1-201ENST00000419267 435 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AC078809.1-201ENST00000427601 140 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF3O43395 RPS29P6-201ENST00000438196 145 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AC243964.1-201ENST00000441814 261 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF3O43395 AC080013.2-201ENST00000460866 323 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 RPS27P27-201ENST00000498779 255 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 MTND5P5-201ENST00000503764 376 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AC022447.4-201ENST00000504053 364 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms