Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CLOCKO15516 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CLOCKO15516 AC005771.1-201ENST00000585581 349 ntBASIC1.6□□□□□ -2.15
CLOCKO15516 AC091135.1-201ENST00000585943 307 ntBASIC1.6□□□□□ -2.15
CLOCKO15516 CYP2C61P-201ENST00000604072 290 ntBASIC1.6□□□□□ -2.15
CLOCKO15516 AC091304.9-201ENST00000612091 226 ntBASIC1.6□□□□□ -2.15
CLOCKO15516 AC063943.3-201ENST00000615562 356 ntBASIC1.6□□□□□ -2.15
CLOCKO15516 AL359740.1-201ENST00000624340 592 ntBASIC1.6□□□□□ -2.15
CLOCKO15516 RNU6-743P-201ENST00000364151 106 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 RNA5SP501-201ENST00000410990 112 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.59□□□□□ -2.15
CLOCKO15516 CALM2P2-201ENST00000428512 440 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AL645568.3-201ENST00000433683 316 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 MTATP6P16-201ENST00000434543 526 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.59□□□□□ -2.15
CLOCKO15516 UBE2D3P4-201ENST00000441973 436 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 TAF9P1-201ENST00000445421 515 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.59□□□□□ -2.15
CLOCKO15516 TAF9P2-201ENST00000454958 515 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AC116562.3-201ENST00000506136 177 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 MTND2P33-201ENST00000506452 1031 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 MTND3P25-201ENST00000509243 135 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.59□□□□□ -2.15
CLOCKO15516 SNORA3.4-201ENST00000515969 96 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AC068587.5-201ENST00000528506 175 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AP002453.2-201ENST00000533503 320 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 MIR3908-201ENST00000579798 126 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 WISP1-OT1-201ENST00000602893 642 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AL121992.2-201ENST00000606262 256 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AC004223.4-201ENST00000612426 332 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 AC099842.1-201ENST00000619919 596 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.59□□□□□ -2.15
CLOCKO15516 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CLOCKO15516 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.58□□□□□ -2.16
CLOCKO15516 Y_RNA.99-201ENST00000363138 105 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 RNU5E-7P-201ENST00000365290 117 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 RNU6-169P-201ENST00000365336 107 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 MIR1294-201ENST00000408503 142 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 Y_RNA.598-201ENST00000410480 95 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC009310.1-201ENST00000414414 451 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.58□□□□□ -2.16
CLOCKO15516 MTND4P20-201ENST00000424125 869 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AL591043.1-201ENST00000432461 424 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC000111.3-201ENST00000433478 193 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
CLOCKO15516 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.58□□□□□ -2.16
CLOCKO15516 AL122001.1-201ENST00000457027 370 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.58□□□□□ -2.16
CLOCKO15516 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.58□□□□□ -2.16
CLOCKO15516 AC093259.1-201ENST00000509755 300 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC096745.1-201ENST00000509945 370 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 SCARNA24.1-201ENST00000516465 137 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 RNU6-1220P-201ENST00000517126 108 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.58□□□□□ -2.16
CLOCKO15516 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.58□□□□□ -2.16
CLOCKO15516 AC137800.2-201ENST00000574375 120 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC073539.2-201ENST00000597113 165 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC011458.1-201ENST00000604034 617 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC027449.1-201ENST00000608890 407 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC131159.1-201ENST00000621854 213 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 AC138649.3-201ENST00000622154 254 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 MIR1248-201ENST00000629190 106 ntBASIC1.58□□□□□ -2.16
CLOCKO15516 Y_RNA.576-201ENST00000384781 102 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 RNU6-607P-201ENST00000411283 108 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 POLHP1-201ENST00000411806 470 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.57□□□□□ -2.16
CLOCKO15516 AL590556.1-201ENST00000423231 483 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.57□□□□□ -2.16
CLOCKO15516 RAP1BP2-201ENST00000478270 544 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.57□□□□□ -2.16
CLOCKO15516 FABP5P5-201ENST00000515537 406 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 RNU6-991P-201ENST00000516168 107 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 RNU2-46P-201ENST00000517038 113 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.57□□□□□ -2.16
CLOCKO15516 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.57□□□□□ -2.16
CLOCKO15516 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.57□□□□□ -2.16
CLOCKO15516 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.57□□□□□ -2.16
CLOCKO15516 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
CLOCKO15516 AL022161.1-201ENST00000604390 213 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AC068944.2-201ENST00000610373 403 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AC009159.2-201ENST00000617603 606 ntBASIC1.57□□□□□ -2.16
CLOCKO15516 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.57□□□□□ -2.16
CLOCKO15516 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
CLOCKO15516 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CLOCKO15516 RNU6-527P-201ENST00000363425 104 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 RNU6-1222P-201ENST00000384615 107 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 RNU2-3P-201ENST00000410144 191 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 VN1R36P-201ENST00000414936 291 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 Z99497.1-201ENST00000421282 135 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 AC011233.1-201ENST00000422812 283 ntBASIC1.56□□□□□ -2.16
CLOCKO15516 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.56□□□□□ -2.16
CLOCKO15516 AC104850.1-201ENST00000435940 476 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms