Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-989P-201ENST00000362756 107 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 Y_RNA.118-201ENST00000363300 101 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 Y_RNA.276-201ENST00000364732 109 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RNU6-1303P-201ENST00000364841 107 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 MIR124-3-201ENST00000384866 87 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RNU6-1093P-201ENST00000391194 107 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RNU6-1156P-201ENST00000410365 100 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 UBE2V1P4-201ENST00000425374 344 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN1O15353 AL591704.1-201ENST00000432574 275 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 AL353997.1-201ENST00000432936 108 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 AC125238.1-201ENST00000448842 249 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 AL162389.1-201ENST00000449233 177 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 HMGB3P8-201ENST00000449709 577 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 OR2AQ1P-201ENST00000451972 200 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 snoU109.4-201ENST00000458953 143 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RPL39P38-201ENST00000467018 153 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXN1O15353 AC011005.2-201ENST00000487324 359 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RPL17P19-201ENST00000489069 552 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RPS29P21-201ENST00000496272 170 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 HMGB1P35-201ENST00000503360 598 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 SNORA25.11-201ENST00000515935 105 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RNU6-138P-201ENST00000515952 107 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 RNU6-789P-201ENST00000517105 102 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 CR383656.7-201ENST00000548164 174 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 AC079600.2-201ENST00000550076 130 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN1O15353 HMGN2P28-201ENST00000606102 262 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
FOXN1O15353 AC008669.1-201ENST00000565823 2178 ntBASIC3.62□□□□□ -1.83
FOXN1O15353 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXN1O15353 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
FOXN1O15353 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXN1O15353 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXN1O15353 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
FOXN1O15353 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
FOXN1O15353 RNU4-42P-201ENST00000364738 142 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 RNU6-45P-201ENST00000384471 107 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 RNU6-821P-201ENST00000390995 107 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 SNORA3.2-201ENST00000408221 125 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 AL590135.1-201ENST00000422215 156 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN1O15353 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXN1O15353 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN1O15353 NDUFS5P3-201ENST00000450668 321 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 MTCO3P8-201ENST00000453691 755 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 RPL23AP31-201ENST00000456160 467 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 SNORD109B-201ENST00000458961 67 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 SNORD109A-201ENST00000459128 67 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 AP000926.1-201ENST00000479573 241 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXN1O15353 RNU6-111P-201ENST00000517179 105 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 AC104576.1-201ENST00000524225 88 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN1O15353 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXN1O15353 MIR622-201ENST00000638396 96 ntBASIC3.61□□□□□ -1.83
FOXN1O15353 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXN1O15353 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXN1O15353 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXN1O15353 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.61□□□□□ -1.83
FOXN1O15353 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN1O15353 Y_RNA.19-201ENST00000362462 99 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-770P-201ENST00000363929 105 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-200P-201ENST00000364743 107 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-805P-201ENST00000365643 106 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-1329P-201ENST00000365664 107 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-190P-201ENST00000384154 102 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-14P-201ENST00000384630 106 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 Y_RNA.551-201ENST00000384661 102 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 SNORA19-201ENST00000384737 128 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 Y_RNA.577-201ENST00000384794 101 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AC110754.1-201ENST00000399740 601 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 MIR1289-2-201ENST00000408360 111 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AC092447.6-201ENST00000414578 210 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AC139712.2-201ENST00000424302 339 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 NEFMP1-201ENST00000443423 1006 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AC234775.1-201ENST00000454247 670 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU7-138P-201ENST00000459479 64 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 HMGB1P25-201ENST00000468402 607 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RPS27AP9-201ENST00000477681 438 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AC018437.1-201ENST00000492214 406 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AC093852.1-201ENST00000503587 266 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RNU6-390P-201ENST00000516259 103 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN1O15353 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN1O15353 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN1O15353 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN1O15353 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXN1O15353 AC174048.1-201ENST00000603389 144 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AL031176.1-201ENST00000604554 466 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 U73479.1-201ENST00000618062 168 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 AL138825.1-201ENST00000618587 192 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FOXN1O15353 DDX10P1-201ENST00000448545 1933 ntBASIC3.6□□□□□ -1.83
FOXN1O15353 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXN1O15353 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXN1O15353 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms