Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR19B1-201ENST00000384829 87 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 RNU6-1176P-201ENST00000390955 107 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 AL590556.1-201ENST00000423231 483 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 TXNL1P1-201ENST00000429528 554 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGB3O15347 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGB3O15347 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGB3O15347 HMGN2P9-201ENST00000476875 229 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 MTND2P33-201ENST00000506452 1031 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 AC079140.3-201ENST00000511111 550 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 SNORD60.2-201ENST00000516883 86 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 RNU6-1028P-201ENST00000517164 93 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 SUMO2P18-201ENST00000518873 252 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 AL138889.2-201ENST00000603883 242 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 AL136363.2-201ENST00000604173 851 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 AC008945.2-201ENST00000606056 604 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 SCARNA4-202ENST00000625402 129 ntBASIC0.66□□□□□ -2.3
HMGB3O15347 SNORA4.1-201ENST00000364263 144 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 RNU2-7P-201ENST00000410794 178 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 MTND4P15-201ENST00000437913 1033 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGB3O15347 RPS27P1-201ENST00000450552 247 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC093899.1-201ENST00000457984 376 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGB3O15347 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGB3O15347 AC005741.1-201ENST00000511094 432 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC008837.2-201ENST00000513076 418 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 SNORA43.2-201ENST00000516652 128 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC008088.1-201ENST00000580993 280 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC091135.1-201ENST00000585943 307 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AL158827.2-201ENST00000602494 330 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC069114.2-201ENST00000604699 304 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC080078.3-201ENST00000605407 463 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC092574.1-201ENST00000609771 420 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC124016.2-201ENST00000610058 665 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AL691447.3-201ENST00000635020 330 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 AC241585.2-209ENST00000638217 143 ntBASIC0.65□□□□□ -2.31
HMGB3O15347 OR4G2P-201ENST00000328113 903 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 USP9YP33-201ENST00000412220 421 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 USP9YP11-201ENST00000427537 717 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AL365400.1-201ENST00000431854 640 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 snoU13.26-201ENST00000459452 105 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AC145146.1-201ENST00000496370 254 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AC119751.4-201ENST00000507498 357 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 RNU6-322P-201ENST00000516010 103 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 BNIP3P6-201ENST00000549284 499 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGB3O15347 AP001004.1-201ENST00000582468 324 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AL353778.1-201ENST00000603149 408 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 FAM71BP1-201ENST00000604431 523 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 BNIP3P19-201ENST00000605397 577 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 AL158163.2-201ENST00000619110 700 ntBASIC0.64□□□□□ -2.31
HMGB3O15347 RNU6-1019P-201ENST00000364424 107 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC092809.3-201ENST00000415453 231 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 MTND4P20-201ENST00000424125 869 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.63□□□□□ -2.31
HMGB3O15347 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGB3O15347 AL122001.1-201ENST00000457027 370 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC006026.2-201ENST00000457376 180 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC113347.3-201ENST00000509113 148 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 MIR449C-201ENST00000516047 92 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 RNA5SP503-201ENST00000517047 117 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.63□□□□□ -2.31
HMGB3O15347 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGB3O15347 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.63□□□□□ -2.31
HMGB3O15347 AP000907.2-201ENST00000530827 353 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.63□□□□□ -2.31
HMGB3O15347 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGB3O15347 BNIP3P26-201ENST00000600827 554 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 VN1R82P-201ENST00000601481 356 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC005776.1-201ENST00000603164 290 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AL590229.1-201ENST00000603497 542 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC018889.1-201ENST00000605372 397 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 RNU6-87P-201ENST00000607561 108 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 AC024940.5-201ENST00000622889 474 ntBASIC0.63□□□□□ -2.31
HMGB3O15347 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGB3O15347 AL589826.1-201ENST00000340697 249 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 MIR10A-201ENST00000385043 110 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 Y_RNA.578-201ENST00000390903 88 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 RAP1BP3-201ENST00000407180 549 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.62□□□□□ -2.31
HMGB3O15347 MTND4P3-201ENST00000417829 541 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGB3O15347 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGB3O15347 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms