Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.09□□□□□ -2.42
CPSF4LA6NMK7 AL159152.1-201ENST00000635019 2587 ntBASIC-0.09□□□□□ -2.42
CPSF4LA6NMK7 MIR340-201ENST00000362125 95 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 MIR103A1-201ENST00000362165 78 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 RNA5SP259-201ENST00000365541 109 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC011233.1-201ENST00000422812 283 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 RAD1P2-201ENST00000446414 663 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AL031313.1-201ENST00000448435 256 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 snoU13.30-201ENST00000458951 104 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 snoU13.27-201ENST00000459278 104 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 RPL32P14-201ENST00000463196 378 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC023194.1-201ENST00000493084 308 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 RNU6-927P-201ENST00000516199 100 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 OR6C7P-201ENST00000547875 934 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 MIR4768-201ENST00000585270 74 ntBASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CPSF4LA6NMK7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 RNU6-529P-201ENST00000363383 104 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 RNU6-657P-201ENST00000383904 107 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 SNORA80D-201ENST00000384488 135 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 RNU6-950P-201ENST00000384651 107 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 MIR32-201ENST00000384965 70 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 CALM2P3-201ENST00000400429 449 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 MTND5P14-201ENST00000441481 1267 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AL606662.1-201ENST00000445763 553 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AL050341.1-201ENST00000447743 313 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC104982.1-201ENST00000478775 574 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 SNORA62.5-201ENST00000516634 120 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AP003327.1-201ENST00000529684 127 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 BNIP3P6-201ENST00000549284 499 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AL136520.1-202ENST00000555494 763 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC136618.2-201ENST00000575091 400 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC012557.2-201ENST00000605919 418 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC093788.1-201ENST00000609356 927 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AL360219.1-201ENST00000610230 366 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC123767.1-202ENST00000620407 817 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 LINC00216-201ENST00000623548 1126 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 AC100810.6-201ENST00000638068 285 ntBASIC-0.11□□□□□ -2.43
CPSF4LA6NMK7 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 Y_RNA.40-201ENST00000362645 93 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 RNA5SP264-201ENST00000363115 107 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 RNU6-188P-201ENST00000364207 107 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AC244098.3-201ENST00000424803 96 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 ISCA1P1-201ENST00000426679 387 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 NIFKP8-201ENST00000560500 874 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AL132657.2-201ENST00000564417 358 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 RMST_4.1-201ENST00000616886 107 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 AC002550.2-201ENST00000621246 394 ntBASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.12□□□□□ -2.43
CPSF4LA6NMK7 RNU6-222P-201ENST00000362438 107 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 SNORD3E-201ENST00000362899 217 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 SNORA42.1-201ENST00000363515 137 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 RNY1-201ENST00000364228 113 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 SNORD116-23-201ENST00000384645 92 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 RAC1P8-201ENST00000427086 527 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 RPL31P35-201ENST00000431058 377 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 FABP5P4-201ENST00000437203 171 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 BRK1P2-201ENST00000442875 223 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 RNU6-333P-201ENST00000459117 107 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 RNU7-21P-201ENST00000459430 62 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC118282.2-201ENST00000508739 374 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 SNORD60.2-201ENST00000516883 86 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms