Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SMIM11P1-201ENST00000369586 178 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MTND4P3-201ENST00000417829 541 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL365338.1-201ENST00000422282 858 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MTCO2P25-201ENST00000447065 681 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC012308.1-201ENST00000451232 178 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 OR2AQ1P-201ENST00000451972 200 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC009646.1-201ENST00000510455 318 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR1273C-201ENST00000578669 77 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC022893.3-201ENST00000607665 437 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC130324.3-201ENST00000614165 542 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC063943.3-201ENST00000615562 356 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC120349.3-201ENST00000624377 529 ntBASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 SNORD3E-201ENST00000362899 217 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNY1-201ENST00000364228 113 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-72P-201ENST00000384285 79 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU11-5P-201ENST00000391216 129 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC092809.3-201ENST00000415453 231 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL589872.1-201ENST00000426602 288 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 USP9YP11-201ENST00000427537 717 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CBX3P6-201ENST00000430257 527 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 KATNBL1P3-201ENST00000443475 909 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 USP9YP17-201ENST00000444617 696 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 snoU109.2-201ENST00000459316 135 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC079140.2-201ENST00000506193 142 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC021146.8-201ENST00000507455 733 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CENPUP1-201ENST00000526649 1202 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RAB11AP2-201ENST00000545905 639 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CYP3A52P-201ENST00000563326 91 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC137800.2-201ENST00000574375 120 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR5094-201ENST00000578766 85 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MTATP6P3-201ENST00000581686 676 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC022022.2-201ENST00000602989 360 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC016727.2-201ENST00000603988 621 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL365204.3-201ENST00000612448 685 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL512506.1-201ENST00000613918 449 ntBASIC0.69□□□□□ -2.3
TCRBV4S1A1TA0A5B7 LINC02555-201ENST00000563933 1951 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-224P-201ENST00000384055 107 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 SNORA70.7-201ENST00000384159 133 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 SNORD116-20-201ENST00000384529 92 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RN7SKP266-201ENST00000410232 287 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC009518.2-201ENST00000418056 731 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC108059.3-201ENST00000456388 214 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 HMGN1P13-201ENST00000505795 138 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU7-40P-201ENST00000516397 64 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNA5SP404-201ENST00000517118 132 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MTND3P13-201ENST00000574391 343 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AP003465.2-201ENST00000602571 373 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC013244.2-201ENST00000603396 103 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC092574.1-201ENST00000609771 420 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL355816.2-201ENST00000610049 647 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL159153.1-201ENST00000619688 317 ntBASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-395P-201ENST00000365662 106 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-26P-201ENST00000383985 107 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR548B-201ENST00000385247 97 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RNU6-278P-201ENST00000390945 109 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RPL23AP32-201ENST00000395315 459 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MRPL35P1-201ENST00000404272 572 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 MIR320C1-201ENST00000408566 88 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 Y_RNA.623-201ENST00000411128 95 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AL161935.2-201ENST00000414627 60 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 RPL21P111-201ENST00000418453 477 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 C8orf59P1-201ENST00000429930 303 ntBASIC0.67□□□□□ -2.3
TCRBV4S1A1TA0A5B7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms