Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HMGB1P30-201ENST00000492455 606 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 RNA5SP481-201ENST00000516814 122 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 SLC2A13P1-201ENST00000531560 322 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AL442163.3-201ENST00000554110 156 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AL358072.1-201ENST00000604156 575 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 KATNBL1P5-201ENST00000605015 517 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 RMST_4.1-201ENST00000616886 107 ntBASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TCRBV3S1A0A5B6 AC023934.1-201ENST00000574529 2389 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-110P-201ENST00000384508 104 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 MTCO1P56-201ENST00000401674 224 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 RNU2-7P-201ENST00000410794 178 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC063976.4-201ENST00000421971 163 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC104417.1-201ENST00000523974 751 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AL590705.4-201ENST00000532209 134 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AL121579.1-201ENST00000555129 305 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 MIR4714-201ENST00000580728 77 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 MIR4293-201ENST00000584305 78 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 BNIP3P9-201ENST00000603714 553 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC107304.1-201ENST00000604229 296 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC105148.1-201ENST00000604961 409 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AP000654.2-201ENST00000605633 586 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AP001596.2-201ENST00000608410 312 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC104465.1-201ENST00000611365 139 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 AC245060.5-201ENST00000610778 3293 ntBASIC0.3□□□□□ -2.36
TCRBV3S1A0A5B6 CDR1-202ENST00000625883 1485 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 ELL2P3-201ENST00000457883 1602 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 SNORA4.3-201ENST00000365564 137 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-910P-201ENST00000390844 107 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RAP1BP3-201ENST00000407180 549 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 AL357139.1-201ENST00000407792 426 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RNU2-42P-201ENST00000410697 113 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 AC123900.1-201ENST00000420390 96 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 SEPT14P24-201ENST00000447236 180 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RPL7P55-201ENST00000450522 746 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RPL18AP17-201ENST00000455326 198 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 AC079140.3-201ENST00000511111 550 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 MIR449C-201ENST00000516047 92 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-1102P-201ENST00000516149 96 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RNA5SP490-201ENST00000517141 136 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 AC092325.1-201ENST00000566449 554 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 AC098483.2-201ENST00000603158 454 ntBASIC0.29□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-212P-201ENST00000362642 104 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 RNU4-79P-201ENST00000362764 141 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 U3.8-201ENST00000363675 217 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC083799.1-201ENST00000366451 910 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 SNORA75B-201ENST00000384053 137 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 Y_RNA.534-201ENST00000384599 112 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 MIR200A-201ENST00000384875 90 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AL079342.2-201ENST00000403367 482 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 RNA5SP390-201ENST00000410191 113 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC068533.2-201ENST00000411872 306 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AL008629.1-201ENST00000438615 184 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 FTH1P25-201ENST00000447665 469 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-229P-201ENST00000516614 102 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 RNU6-143P-201ENST00000516942 93 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC087897.1-201ENST00000550134 156 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC069114.2-201ENST00000604699 304 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 MIR3976-201ENST00000606807 139 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
TCRBV3S1A0A5B6 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
TCRBV3S1A0A5B6 AL391994.1-201ENST00000254724 282 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-862P-201ENST00000362804 105 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1019P-201ENST00000364424 107 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 SNORD32B-201ENST00000364460 84 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-744P-201ENST00000365557 107 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1316P-201ENST00000384242 108 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 MIR19A-201ENST00000384878 82 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 SNORD12-201ENST00000391002 90 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 DEFB130D-201ENST00000426866 237 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RAB28P5-201ENST00000427490 651 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC098934.3-201ENST00000430450 190 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 MTCO3P43-201ENST00000440974 771 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms